Bipolaris sorokiniana: COCSADRAFT_293916
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Entry
COCSADRAFT_293916 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCSADRAFT_293916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_293916
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
COCSADRAFT_293916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
19136040
NCBI-ProteinID:
XP_007697406
JGI:
Cocsa1_293916
UniProt:
M2RMK3
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MFNPNFYDQDDPMAMYQAIRRGGGAPRRFDEYFRCYPIAMLPGPERPEANHGGKVFLPPS
ALDKLTRLHITYPMLFELINGKQDGKKTHAGVLEFIAEEGKIYLPYWLMETLKLEPGDLL
QVKSTDIPLGTFIKLQPQDSSFLEISDPKAVLENAFRNFSCLTTGDIFTFAYNDNVYSIA
VLETKPEHPSKAVCTIETDLSVDFAPPVGYQEPQRTSGTSTPRSGKGVMTGKGGTLHPHG
TMADAINYAAIAPSATTAANGAKATSSNFLTTGHKLLKKGSKAPTPQASTPVAGQSTNPP
PTVRRTNGPQPLRLPPNKLFFGYEITPLKNKEEAGEQKESKHFEGGGQTLRKKKGDK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacccaaacttttacgaccaagacgaccccatggccatgtatcaggctatccga
cgcggcggtggcgcacctaggcgctttgacgagtactttcggtgctaccccattgccatg
ttgcccggcccagagcgcccagaagcaaaccacggcggaaaggtgttccttcctcccagc
gctctcgacaagctcactaggctgcacatcacatatcctatgctcttcgagctcatcaat
gggaaacaagatgggaagaagacacacgcaggtgtgctagagttcattgcagaagagggc
aagatctatctgccatactggctgatggagacgctcaagctggagcccggcgacctcttg
caagtcaagtcgaccgacatacctctcgggaccttcataaaattgcaaccgcaagattct
tccttcctcgaaatctcggatccaaaagctgtccttgaaaacgcgtttcggaacttctca
tgtcttaccacgggcgatatatttacttttgcgtacaacgacaatgtgtacagtatagct
gtgctcgagaccaagccagaacatccaagcaaggctgtatgcactatcgagacggatctg
tcggtcgactttgcaccaccagtgggctaccaagagccgcagaggacgagtgggacaagc
accccacgcagcggaaagggtgtcatgactggcaagggcggaactctgcacccgcacggc
accatggcggatgcgatcaactacgcggctattgcgccatcggcaacaactgccgccaat
ggggcaaaagcaacatcatccaattttcttacaaccggtcacaaactccttaagaagggt
agcaaggcacccaccccgcaagcctctacaccggtcgcaggacaatccaccaacccaccg
ccaactgtgcgacgcacaaatggaccacagccccttaggttaccacccaacaagttgttc
ttcgggtatgaaattacgccgctcaagaataaggaagaggcaggcgagcaaaaggagtcg
aagcactttgaaggtggaggccaaacgctgcgaaagaagaagggggataaataa
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