Bipolaris sorokiniana: COCSADRAFT_302639
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Entry
COCSADRAFT_302639 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_302639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_302639
Spliceosome [BR:
bsc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCSADRAFT_302639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
19136210
NCBI-ProteinID:
XP_007698200
JGI:
Cocsa1_302639
UniProt:
M2SHW4
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MTMAEKRPYPEGQGPNSDVKRPKPSDAVEAAKARAKAKAAEIAARFAKPAASPTPPPPAA
GASDAVQDKLAAMKARMEALKAGSAAAKPPAPDSTGPRFATTLGNRRSETPKVDAKPKAA
MMSQKQPQDEELENPYFDPKTAALAKKRGPRVLSFNEHGKYLDQASKLRAQRRLEEIKKT
LAIQARRAGLDENSERGFLVQPPPDIEWWDEGILVEPNYDCIDDPSKVKVDTDDSIITLY
VQHPPLLKAPQDQRLVQVKPMYLTTKETQKLRRMRRAADLKEHQAKIRLGLEPPPPPKVK
RGNMMRVMGEQAIADPTAVEMLVESQIQQRHDDHVTANEERKLTKEEKQAKLAANQEKDA
QKGLYMCVFKINTLAYGKHRFQIDSNAKEHTLTGITLFNPDLNLVVVEGGAYAINKYKKL
MLQRIKWHENGPPTENQMEKQASDPQWLRPLTDTGDIKDHSSNKCTLIFEGEIKERSFRK
WGSRVCETAGEARETLGRAKLDSLWALAKSIE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggctgagaagcgcccctatcccgaggggcagggcccgaatagcgatgtgaag
cgcccgaaaccatcagatgctgtcgaagctgcaaaggctagagccaaagcaaaggccgct
gaaattgcagcccgattcgcgaagcccgctgcctctccaacccccccaccgccggcggct
ggggcaagcgacgcggttcaggacaaactggcagccatgaaggcgaggatggaggcgctg
aaggcgggctcagcagcagccaagccccccgcccccgattccacaggcccacgctttgcg
acaaccctgggcaaccgtcgctcggaaacgcccaaggtcgatgcgaaacccaaggccgct
atgatgagccaaaaacaaccgcaagacgaagagctggagaacccctactttgaccccaag
actgctgcccttgccaagaagaggggcccccgtgtcctctcgttcaacgaacatggaaag
tacctcgaccaggcctcgaagctacgcgcacaacggcgactcgaggagattaaaaagacg
ctcgccatccaagcccgccgcgctggtcttgatgaaaatagcgaacgcggattcctggtt
cagccccctccggatattgaatggtgggacgagggtatcctagtcgagcccaactacgat
tgcatcgacgacccgtccaaagtcaaggttgacaccgatgattccatcataacactatat
gtccagcatccgccgctacttaaagcgccccaagatcagcgcttggtccaagttaagccc
atgtatcttaccaccaaagaaacacagaagctacgcaggatgcgccgtgctgcagacctc
aaagaacaccaggctaaaattcgtcttggtcttgaaccgccaccaccaccaaaggtcaag
cgcggtaacatgatgcgtgtcatgggagagcaggccattgcggatcccacggctgttgag
atgcttgtcgaatcacagatccagcagcgtcatgatgatcatgttacagcaaacgaagag
cgcaagttgaccaaagaagaaaaacaagcaaagcttgctgcgaaccaagaaaaggatgca
caaaagggactatatatgtgtgtcttcaaaatcaatactctggcgtatggcaagcaccgc
ttccagatcgacagcaacgccaaggaacataccctcactggaattacactgttcaatccc
gacctgaatctggttgtagttgaaggaggcgcgtatgcaatcaacaagtacaagaagctc
atgctccagcgtattaagtggcacgagaatggaccacccacagagaaccagatggagaag
caagcctcggatccgcaatggctgagaccgctcaccgacactggggatataaaggaccac
tcgtccaacaagtgtacgctcatcttcgagggtgagatcaaggagcgatctttccgaaaa
tggggctcaagggtatgcgagaccgctggtgaagctcgcgagacacttggccgcgccaag
cttgacagcttatgggcgcttgctaagagtatcgaatga
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