KEGG   Bipolaris sorokiniana: COCSADRAFT_31825
Entry
COCSADRAFT_31825  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03030  DNA replication
bsc03410  Base excision repair
bsc03420  Nucleotide excision repair
bsc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCSADRAFT_31825
   03410 Base excision repair
    COCSADRAFT_31825
   03420 Nucleotide excision repair
    COCSADRAFT_31825
   03430 Mismatch repair
    COCSADRAFT_31825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsc03032]
    COCSADRAFT_31825
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_31825
   03400 DNA repair and recombination proteins [BR:bsc03400]
    COCSADRAFT_31825
DNA replication proteins [BR:bsc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    COCSADRAFT_31825
  DNA Replication Termination Factors
   ELG1-RFC complex
    COCSADRAFT_31825
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    COCSADRAFT_31825
DNA repair and recombination proteins [BR:bsc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     COCSADRAFT_31825
  Check point factors
   HRAD17(Rad24)-RFC complex
    COCSADRAFT_31825
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_22 AAA AAA_16 Rad17 AAA_24 Rep_fac_C ATPase_2 ABC_tran T4SS-DNA_transf
Other DBs
NCBI-GeneID: 19136539
NCBI-ProteinID: XP_007694120
JGI: Cocsa1_31825
UniProt: M2TK26
LinkDB
Position
Unknown
AA seq 355 aa
MALLVDKHRPRNLEALSYHPELSDRLRALAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTTTNRKLEFNIVASVYHLEITPSDVGNYDRVVVQDLLKEVAQTQQ
VDLGAKQRFKIVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTSNIIAPIRSRTL
LVRVAAPTEAEICDVLSKVGKKEGWKDIESLHQRIAKDSGRNLRKALLMFEAVHAQNEKI
TDQTHIPPPDWEALIEQIARQIVEERSPQRLLQVRASLYDLLSHCIDPTTIIKTLTWKLI
PKTDDALKPEVIKWAAFYEHRCKMGAKHIFHLEAFVAKYMRLYESYSMGLDFDSA
NT seq 1068 nt   +upstreamnt  +downstreamnt
atggcacttttagtggacaagcatcggccgcgtaaccttgaagcgctcagctaccatcct
gagctttcagatcgcctacgagctctagcacaaagcggcgacttccctcatctcctcgta
tacggcccttctggagcaggcaagaaaacgcgcatcgtcgcaaccctcaaagaactctat
ggccctggtgtcgaaaagatcaagatcgatgcgcgtgtcttccagaccacaacgaaccgc
aagctcgaattcaacattgtcgcctccgtatatcacctcgagattacgccttcagatgtt
ggtaactatgacagggtagtggtacaggacttgctcaaggaggtcgcgcagacgcagcag
gtcgacttgggcgcaaagcaacgcttcaagattgtcgtcatcaacgaagccgaccatctg
acgagagatgcccaagcagcgttaaggcgaaccatggaaaaatacagccccaacttgcga
ttgattctgctggcaaactcgacgagcaacatcattgctcccatcagaagtagaacgttg
cttgtcagagttgcggcgcctaccgaggctgagatctgcgatgtgctgagcaaagtggga
aagaaggagggatggaaggatattgaaagcttacaccagaggatagcgaaagatagtgga
cgaaacctgcgaaaggctctcttgatgttcgaagcagtgcatgcacaaaatgagaagatt
acagatcagacacatattccccctcccgattgggaagcgctcatcgagcagattgcccgc
caaattgtcgaagagcgctctccccaacggctccttcaggttcgcgcttccctctacgat
cttctgtcacactgtatcgacccgacgactatcatcaaaacactcacctggaaactcata
ccaaaaacggatgatgcactgaagccagaggtcatcaaatgggcggccttttatgagcat
aggtgtaagatgggcgctaagcatatattccacctcgaggcgtttgttgccaagtacatg
aggctatacgaaagctattccatgggcttggacttcgattccgcataa

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