Bipolaris sorokiniana: COCSADRAFT_319371
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Entry
COCSADRAFT_319371 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsc03016
]
COCSADRAFT_319371
Enzymes [BR:
bsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
COCSADRAFT_319371
Transfer RNA biogenesis [BR:
bsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCSADRAFT_319371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
19136590
NCBI-ProteinID:
XP_007699673
JGI:
Cocsa1_319371
UniProt:
M2SSF2
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MALVPSPPRDKYPPLPDDKFPWKEPPPVAITPCDPWPPPYYLEDGLRKVTPYHYTYNTYC
KQRWRGREILEIFASEFRDRPAEYYEQAIIDGRVVVNGKPVPSTKTIINNGDIISHTLHR
HEPPCTAQPIGIVHEDNDMIVINKPAGMPVHPAGRYNFNSIIEIMRADRGYGWNPLPCNR
LDRLTSGIMFIGKHKQAAEDLSAQIRGRTVKKEYITRVVGEFPEGEILCEKPILQISPKL
GLNRVRANGKEAKTVFKRLAYYPPKNDGNGTQEQEGEKGPDGQPWKKLRGYSIVRCFPVT
GRTHQLRVHLQFLGHPISNDPIYANQRVFGPSLGRGQSEDDDDEDIMSRLSRMGKEEVAD
AVAYHDEMVDAYNKRKAERMTGEKCKVCDTDLYSDPGVHELGIYLHARRYRCEEGKWDYQ
TGLPDWALPPPGYEGPTEGTEESDPLAVDLKKLGLEDEEPKEKVETS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgtgccttctcccccgcgcgacaaatatccgcctctgcccgacgacaagttt
ccgtggaaagagccgccgcccgtggccattacgccctgcgatccctggccgccgccatac
tacctcgaggatggcctgcgcaaggtgacgccctaccactacacatacaacacctactgc
aaacagcgatggcggggccgcgaaatcctcgagatctttgcgagcgagtttcgcgacaga
cccgccgagtactatgaacaggccatcatcgacggtcgcgtcgttgtcaacggcaagccc
gtacccagcaccaagacaattatcaacaacggcgatatcatctcgcacacgctgcaccgc
catgagccgccctgcactgcccagcccatcggcatcgttcacgaggacaatgatatgatt
gtcatcaacaagcctgcgggcatgccagtccaccccgccggtcgctacaacttcaattcg
atcatcgagatcatgcgcgccgatcgaggatacggttggaatcccctaccctgcaacaga
ctcgaccgcctcacaagtggtatcatgttcattggaaaacacaagcaggctgcagaggac
ctgagtgcgcagatacgaggaaggactgtcaaaaaggaatacatcacacgcgttgttggc
gagtttccagagggcgaaattctatgtgaaaagcccatactccagatcagccccaagctg
ggtctcaatcgcgttcgtgccaatggcaaggaggcaaagacagtcttcaagcgacttgca
tattacccaccgaaaaacgatggaaatggcactcaagagcaggaaggcgagaaaggtcct
gatggtcagccgtggaagaagctccggggctactccatcgtacgctgcttccctgtgacg
ggccggacccaccaactgcgcgttcacctccaatttctcggtcatcctatctccaatgac
cccatatatgccaatcagcgcgtgtttggaccgtctcttggccgtgggcaatctgaagac
gacgatgacgaagacatcatgtcgcgtctctcgcgcatgggcaaggaagaagtggccgat
gcagtcgcctaccacgatgaaatggtcgatgcgtacaacaagcgtaaggccgaacgcatg
acgggcgaaaagtgcaaagtctgtgatacagatctgtatagcgacccaggcgtgcatgaa
ctcggcatctatctccacgcccggagatatcgatgcgaggaaggaaagtgggactaccag
actgggttgcctgattgggcacttccgccacctggctatgaaggccctactgagggtact
gaagagagtgatccattagctgttgacttgaagaagctgggactggaggatgaagaacct
aaagaaaaagttgagacttcatag
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