KEGG   Bipolaris sorokiniana: COCSADRAFT_33602
Entry
COCSADRAFT_33602  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    COCSADRAFT_33602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsc03021]
    COCSADRAFT_33602
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_33602
Transcription machinery [BR:bsc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     COCSADRAFT_33602
   Coactivators
    SAGA/TFTC/STAGA complex
     COCSADRAFT_33602
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     COCSADRAFT_33602
    STAGA complex
     COCSADRAFT_33602
    TFTC complex
     COCSADRAFT_33602
    SAGA complex
     COCSADRAFT_33602
    SLIK complex
     COCSADRAFT_33602
SSDB
Motif
Pfam: WD40 TFIID_NTD2 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT140_1st WDR55 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 WD40_MABP1-WDR62_1st LisH Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_SPT8 PROPPIN DUF2283 Beta-prop_ELP1_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 19137229
NCBI-ProteinID: XP_007695581
JGI: Cocsa1_33602
UniProt: M2THN4
LinkDB
Position
Unknown
AA seq 729 aa
MSGPPQGPGPVRAMSVGNGPPSAGLPPHAAMPPQGGPPPPGSSGPQSQQNLNQIVLEYLS
KKGYVRTEAMLRKESEPQTNGQPLTAQSTEAGGAKYTKAFELLRKYTEDNLDLYRPELRK
LLWPVFVYSFLDLVRDFYTKDAETFFAAYQGLFERDHDEDVKTLRQVRLQSHLQESRIAK
LYLDNKYRITLTTMPFFNLIQFLESKHFDGGSTIIDVIREHLNIVTVDRTATAEKSIAAI
LASGHGDDELPAEDEGIPGHAPGHPLTARHDPEADAARIRLQLGAYPQEAELQDDVRAAL
QEEDAKAAPRPGQPSLLDEFEQRIKREPTEDGPSREFVPLPPSLARDVSMEVQKIIEHRD
RYKMEGRTGGVGPAVSVTMYTFHNTYDSINCIDFSGDNKLVAAGMSESYIRVWSMDGSPL
TSPNDNPDMQPSSSRRLIGHSGPVYAVAFSPSTANPYPSGPPTNSECLLSCSEDKTVRLW
SLDTYTCLVAYRGHDNPIWDLQWGPYGHYFLTGSNDRTARLWSTDHIEPLRIYVGHDNDV
DCVAFHPNNLYVFTGSCDRTVRMWHIAGGNCLRLFTGHTGNVTAISCSPDGKTLASADDA
GNIILWTLETGRRRKRMRGHGKGGIWSLSWSVESSVLVSAGADKTVRVWDVLQETNDKAA
DGVTAKTDGAMTTKGASGTTVTGKKAAKETGVSADQISVFPTKDSPVYKVQFTRMNLVLA
GGAYLPTRS
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgtcagggcccccccaagggcccgggcctgtaagggctatgagtgtaggaaatgggcct
ccaagtgcaggtctgccaccacatgcagccatgccgccgcagggtggccctccaccgcca
ggctcgtcgggaccgcagtcacagcagaatctcaatcaaatcgtattggagtatctctca
aagaagggctatgtccgcaccgaagcgatgctccgcaaggagtccgaaccacaaaccaac
ggacagcctctcaccgctcagagtaccgaagccggcggcgcaaagtacacaaaggcattt
gagctgctgcgcaaatatacagaggataacctggatctgtatagaccagagctgcggaag
ctgttatggcccgtctttgtctattccttcttagacttggtacgcgacttttataccaaa
gacgcagagacattctttgccgcctaccagggcttgttcgagcgcgaccacgacgaagat
gtcaagacgctccgccaagtgcggttacagtctcatttgcaggagagcagaatagcaaaa
ctttacctcgacaacaagtaccgaattacgttgacgacaatgccgttcttcaacctcatt
caattccttgaatctaagcactttgacggcgggtcaacaataatagatgtcatccgcgaa
caccttaatattgtcacagttgacaggacagcgaccgcagagaagagcatagcggcgatt
cttgctagcggacacggcgatgatgagctccctgcagaggacgagggcattccaggacac
gcccccggtcaccctctcacagcgcgccatgaccccgaggcagatgctgcacgaataaga
ctgcaattaggcgcttacccccaggaggcggaactacaggacgatgtccgtgctgctctg
caagaggaagatgccaaagctgcgccaaggccgggccaaccaagtttgttggatgagttt
gagcaacgtatcaagcgggagccgacagaggatggaccctcgcgcgagttcgttccttta
cccccgtcactcgcccgtgatgtctctatggaggtccaaaaaattattgagcaccgagac
cgatataagatggagggaagaaccggcggagtcggacctgctgttagtgttaccatgtat
actttccataacacatatgacagcatcaactgcatagatttttctggggacaacaaactc
gtcgctgccggcatgagcgagtcgtacatccgcgtttggtctatggacggtagccctctc
acttcaccaaatgacaacccagacatgcagccatcatcttctaggcgattgattggccat
tcaggccctgtctacgcggttgccttttccccctctaccgccaacccgtatccttctggt
cctcctacaaactctgaatgtctcctctcgtgctcagaagacaagacagtccgtctgtgg
tctttagatacgtacacctgccttgttgcgtaccgcggccacgataaccccatctgggat
ctccaatggggaccctatggccactacttcctcacaggctcaaacgaccgcaccgcgcgt
ctgtggtcgaccgaccacattgagcctcttcgcatctatgttggccacgacaacgacgtc
gactgcgtcgctttccaccctaataacctctatgtcttcacaggctcgtgcgaccgcaca
gtccgcatgtggcatatcgccggcggtaattgtctgcgcctctttaccggacacaccggc
aacgtcacagctatatcttgctcccccgacggaaagacgctcgcctccgcagatgacgcc
ggcaacatcatcctctggaccctcgaaacaggccgtagacgcaagcgcatgcgtggccat
ggcaaaggcggtatctggtctctctcctggagtgtggagtcgagcgtccttgtttctgcc
ggtgccgacaagacagttcgtgtctgggatgtactacaggaaactaacgataaggctgcc
gacggtgtcactgcgaagacagacggcgcgatgacaacgaaaggcgccagcggcacgacg
gttacgggaaagaaggcggctaaggagacgggcgtgtcggcggatcagatcagcgtgttt
cctacgaaggatagccctgtgtacaaggtccagtttactaggatgaacttggtgcttgcg
ggtggtgcatatctgcctacgcgttcgtag

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