Bipolaris sorokiniana: COCSADRAFT_33622
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Entry
COCSADRAFT_33622 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSADRAFT_33622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_33622
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
COCSADRAFT_33622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
19137235
NCBI-ProteinID:
XP_007695587
JGI:
Cocsa1_33622
UniProt:
M2T2Q0
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAPPAIKRRKLEHSDSEAESEGSFAEFDETNSGADLNGSDAEDGHDESDDLSMDGAQEIE
DGDNDDEEDENMSEDEEESPEAEESVQESKKQTTTAKATSAPKPPKRPAPSLQDGVYTAE
SFKSNIFKLQVDELLEQVKLKYGKKEAPAENAMRTLKTIIEQIPSRDPLPIVKAEKALQS
AGIAIPFPSPRPPKDALYKLQYERPASVNATGSYPLKTATRAEERFAIDLVVTMPKSLFQ
DKDYLNHRYFYKRAYYLACLAAGIKASKEHKFDLFFDRLNGNQLQSVLVVRPSGNGDADD
FSSSKCQINVLVALPEHTFAQNKLLPTSNCVRPKGSEDETSSKTLAATPFYNNSLQSDAN
ITAYLKLLHGTASKAEAFKDACILGRIWLKQRGFGSQIRKGGFGNFEWAAIMAILLQPNA
GTGAQSVSSSFSSYQLFKSTLQFLSRGDLTKKPFIFQASNITITKAETAPVVFDGPRGQN
VLFKMTPWSYKRLQSEAKATVDMLSDSVFDQFDAAFILKTELLKYRYDATLEIPLASLGL
EAGSEEYDSQLGETCRKIHSTLTRALTDRITAISFTMPEEESWSTSSRRPQEKQSKSILI
NFEIDPANATRTVDHGPPAENKQEAAVFRKFWGEKAELRRFKDGSILESVVWTVKDTSAS
VMEQLVLYILSRHHGTQVSEQARFRIDTFGHLVTAGRMQGQSGITPFLPIMNAFSAMEKD
IRDLEELPLQLRHLRAADPQLRYASVDVPTVGHAPASVVLQFEGSGRWPDDLCAIQRTKI
AFLLRMAELLHKLESGYVARVGMENPSQPAQNQAFLDVTVATGFTFRIRIYHDREPTLFE
RQIKDKSLDTQSRESAAASLALYKREFIQSPQHSQALQTLCTRFLALSPAIRLTKKWFAS
HLLAPHFSPELIELLVIRTFLQPQPWPVPSTATTGFLRTLSWISRWDWRHFPLIVDFSTS
FSANPANLEDTSLKGMKSEDIDRLRTRFEAWRRIDPAMNRVVLFAATNLDEEGTTWTDKA
KPEKVVAARLTALAKAATQAVRTDEDGLLKQISNNKEASKVYDALSPESLFVPSISEFDI
VISISSKHSLKSSKSRKPATQFKNLDLQKSSSPLPAPTPLPQLFAGELSEVYGDAVLWFW
DPESLDKIVGLWNPVVTGQRSWKIKVGWNSVPVGKKDKVEIRVNKEAIVHEVKRLGGELV
KSVDAKF
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgcccgcaattaaacgaagaaagctcgagcacagcgactcggaagcagagagc
gaagggagctttgccgaatttgacgaaaccaacagcggtgcagatttaaatggaagcgac
gctgaagatgggcatgacgagagcgacgacctctccatggatggcgcgcaagagatagag
gatggcgacaatgacgacgaagaagatgaaaacatgagtgaagacgaggaagaaagcccc
gaagctgaggagagcgttcaggaaagcaagaagcagaccacaaccgccaaagccacgagc
gcaccaaagccacccaagcggccagcacccagtctccaggacggcgtctacactgcagag
tccttcaagtcgaacattttcaagcttcaggtagacgagctgcttgaacaggtcaaactc
aagtacggcaagaaggaggcacctgctgagaatgcaatgcgaacccttaagactataatc
gagcagattcctagccgcgacccacttccaattgtcaaggccgaaaaggctctccaatca
gctggcatcgcgattcccttccctagccctcgtccaccgaaagatgctttgtacaaactg
caatacgaacgacctgcaagcgtaaacgcaaccggtagctaccccctcaaaactgcgact
cgagccgaggaaagatttgcgattgatcttgtcgtgaccatgccgaagagtctgttccaa
gacaaagattatctgaaccaccgatacttctacaagcgcgcatattatctggcttgtttg
gcggcagggatcaaggcctcaaaagagcacaagtttgatttgttctttgaccgcttgaat
gggaaccagcttcagtctgttctcgtcgtgcgaccgagcggcaacggcgatgcggacgat
ttttctagctcaaaatgtcagatcaacgtgctggtggcgctcccagaacacacttttgct
cagaataagcttctcccaacctccaattgcgtccgacccaaaggtagcgaagacgaaact
tccagcaaaacgctcgcagcgacgcctttctacaacaacagcctgcaatctgatgcgaac
atcacagcatacctcaagctcttgcacggcacagcctcaaaggctgaagctttcaaggat
gcatgcatattggggcgcatttggctgaagcaacgcggatttggcagtcagattcgcaaa
ggagggttcgggaactttgagtgggctgctatcatggctattttgcttcagccaaatgct
ggaacaggtgctcagtcagtctcttcaagtttcagcagttatcaactattcaagtcgacg
ctgcagtttctgtcgcgtggagatctaacgaagaagccattcattttccaagcatccaac
atcactattaccaaggcagaaaccgcccccgtcgtctttgacggaccacgaggacagaac
gtgttgttcaaaatgacgccctggtcgtacaagcgtctgcaatcagaagcaaaggctacc
gtcgacatgttgagcgattctgtattcgatcagttcgatgcagccttcattctgaagact
gaactgctcaagtaccgatacgatgcaacactcgagattccccttgcttcgctcggcctc
gaagctggaagcgaagaatacgattcgcagcttggcgaaacttgtcgaaaaatacacagc
accctgacccgtgcgctgaccgatcgtatcaccgctatatccttcaccatgcctgaggag
gaaagctggtcaacatcctcaaggcgccctcaggaaaagcaaagcaagagcatccttatc
aacttcgaaatagatcctgccaacgccactcgcaccgtggatcatgggcctccagcagaa
aacaaacaggaggctgctgtcttccgcaagttctggggcgagaaagctgaactcaggcgc
ttcaaagatggaagtatcctggaaagtgttgtttggacggtaaaggacacatcagcgtct
gtcatggagcaacttgttctctacatacttagcagacaccatggtacacaggtatctgag
caagccaggttcaggattgatacatttggccaccttgtaacagcaggccgtatgcaggga
cagtctggcatcacgccctttctccccattatgaacgcgtttagtgccatggaaaaagac
attcgggacttggaagagctaccacttcaacttcgccatctaagagctgccgatccgcaa
ctacggtatgcgtctgttgatgttccaactgtgggccacgctccagcatcagttgtattg
caattcgaaggctctgggcgctggccggacgacttgtgcgccattcagcggactaagatt
gccttcctcctccgaatggctgagcttttacataaactggagtctggctatgtcgcccgt
gttggtatggaaaatccctcacagccggctcagaaccaggcattcttggatgtaacagtt
gctacgggcttcacgttccgcattcgcatctaccatgatcgtgagcctacgttattcgaa
cgtcaaatcaaggacaaatcattggacactcaatcgcgcgagtctgctgccgcttctctg
gcactatacaaacgcgaattcatccaatcgcctcaacattcgcaagcactacagacgctc
tgcactagattcttggcactttcaccagcgatacgactgacaaagaaatggttcgcgtca
catctgctcgcaccacacttttcgcccgagctcattgaactacttgttatacggacgttc
ctacagcctcagccatggcctgtaccatcaacagcaacgacaggtttcttacgaacatta
tcgtggatcagtcgatgggactggcgtcatttccctttgatcgtggatttctcaacatcc
ttctccgctaatcctgcaaaccttgaagacacgtctttgaagggcatgaagtcagaagat
attgaccgcttacgaacacgcttcgaggcatggcgacgtatcgatcccgctatgaaccgt
gtcgtacttttcgcagctacaaacctcgatgaggaaggcacgacttggacagacaaagca
aagccagaaaaggtcgttgctgcgcgtttgacagctctggccaaagcagccacgcaggct
gttcgcacagacgaagatggcttgttaaagcagatcagcaacaacaaggaagcatctaaa
gtatacgatgctctaagcccagagtccctcttcgtccccagcatatcagaattcgacatc
gtcatttccatctcatcaaaacacagcctcaaatcgtccaaatcccgcaaacccgccacc
caattcaagaacctcgacctccaaaagtcatcaagccccttgcccgcaccaactccactt
ccccagctctttgccggagaactctcagaagtctacggcgacgcagtgctgtggttctgg
gatccagagagtctggataagattgtaggactgtggaatccggttgttacaggtcagaga
agttggaagatcaaggttgggtggaatagtgtgcctgtcggaaagaaggataaggttgaa
attagggtgaacaaagaggcaatcgtacatgaagttaagaggttgggtggggaattagtg
aagagtgttgatgcgaagttttga
DBGET
integrated database retrieval system