Bipolaris sorokiniana: COCSADRAFT_338463
Help
Entry
COCSADRAFT_338463 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_338463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_338463
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_338463
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
COCSADRAFT_338463
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
COCSADRAFT_338463
U7-dependent histone pre-mRNA processing factors
COCSADRAFT_338463
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
19137336
NCBI-ProteinID:
XP_007701401
JGI:
Cocsa1_338463
UniProt:
M2R8B2
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MTSQTIQQMESARSLALGDGRYYPTIIPGVLPIIGYSEDQSIEIQRWGAEFLAEAFASPA
WPQEAKQSSAPSVLATLKAYLENVDDKSVIKSAIQAAASVYPLVYKHTVSDPSDSQNWGL
MFGIKANILRRMDSATPGVRICCVKFLQQVVLVQTPGVADPRRADHNEISLSIVPRDHPL
IPYASLEAEGHGLLDRLLDIIHGDHSDGLLVTATLNSLGMLIHRRPNAANKILNSVFNFN
PLKLANSPMTPKNKVIIKSIERTTRALLVNIMKRNPENPINGRIQQFLERMHRARVEFFE
ESNRKRPAPAEPTDGLDHAKRQRLVAEPPSRTPSVQPLPPGPISWRQLYTLNSEGSTANF
DVQNFKDPEQLVRIVVPVLQSVNPQKLEQAINAVRARYQTLRQNAASQPVQPPSAPAAED
EEEYEPDFEPEDAEQIMNKLDGIPSNPFSTQQGPSTALAPFKLPEAPSLSEQDVQKYGDM
TVHRAFGMLSSVDETQKSKTTKCGFNRLAATDYGRDAWVTILSRLATRASAGLDDPTDAI
KDEYAVKSTTRSSSAPKISDSIRDSLYQYILYDWKRRIDVAISWLNEEWYNDMILAQSAE
SPLPNGTVNGISPSKPPRGNYHRCALRLIDGILPYIEHTDKIFLRFLSEIPSIDYTLLVR
LKKMAEDPERIDLACNALHYLYMFRPPVRKIVVDVLAEMWAENERAKPSARKLLLRWRPE
VLGSEMAGNNTTQLVVKSEGGVESAGKVEVGAAS
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgcaaacgatacagcagatggagtcggctcggtcgctcgcgttaggcgacggt
agatactatcctaccattataccaggcgtgctccctatcattggttacagtgaagaccag
agcatcgagatacagcgctggggtgccgagtttttggcagaggcttttgcatcaccagca
tggccccaggaggccaagcagagcagcgcgccctcggtgctggctaccctcaaggcctac
ctggagaatgtcgatgacaagagcgtcatcaagagtgccatccaggcggccgccagcgtg
tacccgctcgtatacaaacatactgtctccgaccccagcgattcgcaaaattggggcctc
atgtttggcatcaaagcaaacattttgcgacgaatggactcggccacccctggcgtgcgt
atatgctgcgtcaaattcctccaacaagtcgtcctggtacagacaccaggcgtggcagac
cctaggcgcgccgatcacaacgagatttccctctccattgtgccccgcgatcacccgctt
ataccgtatgcgagcctcgaggctgagggacatggactactggacaggctattggatatc
atacatggggatcacagtgacggattgctcgtgactgccacattgaacagcttgggcatg
ctgatccatcgccgaccaaatgctgcaaataaaatcttgaacagtgttttcaacttcaac
cccttgaagcttgccaattcgccaatgacacctaagaacaaggtcattatcaaatcgatt
gagcgtacaacaagggcgttgctcgtcaacattatgaagaggaaccccgagaacccaatc
aatggacgtatacaacagttcctggaacgcatgcatcgtgcccgtgtggaattctttgag
gaatctaatcgtaaacgaccagcacccgctgagccgaccgatggccttgatcacgccaag
agacagcgacttgtggctgagcctcccagtcgtacaccctctgttcagcctctgccgcct
ggtccaatcagctggcgacaattatatacgctcaattctgaaggcagcactgcaaacttt
gatgtgcaaaatttcaaagatcctgagcaattagtcaggattgtggtgccagtcctgcag
tcggtcaacccgcaaaagcttgaacaagcaattaatgctgtccgcgctcggtatcaaaca
ctgcgtcagaacgctgcaagccaacctgttcagccaccaagcgctcctgccgcagaagac
gaagaggaatatgagcccgactttgaacccgaagatgcggagcaaatcatgaacaagctt
gacggtatcccgtcgaatcccttctcaacccaacaaggcccatccactgctctagcaccc
ttcaagctgcccgaagccccttcattatccgaacaggatgtccagaagtacggtgacatg
accgtacatcgcgccttcggcatgctgagcagtgtagatgagacacaaaagagcaagacc
acaaaatgtggttttaaccgtctagcagcaacagactacggccgcgacgcctgggtcacc
atcctctcccgcctcgccacacgcgcaagcgccggtctcgacgaccccactgatgccatc
aaagatgagtacgccgtcaaaagcaccacccgcagcagcagtgcccccaaaatcagcgac
tccatccgcgactccctctaccaatatatcctctacgactggaaacgccgcatcgacgtc
gcaatctcctggctcaacgaagaatggtacaacgacatgatcctcgctcaatccgccgag
tcccccttgccaaacggcaccgtaaacggcatctccccctccaaacccccaagaggcaac
taccaccgctgcgccctccgcctcatcgacggtatcctcccttacatcgagcacacggat
aaaatcttcctgcgcttcctctcggaaatcccttcaatagactacacgctccttgttcgc
ctcaagaaaatggcagaggatcccgagcgcatcgacctcgcttgcaacgctctacactac
ttgtacatgtttcgtcccccagtccgcaagattgtcgttgatgtcctcgcggagatgtgg
gcggagaatgagagggcgaagccgagtgcacgcaagttgctgcttagatggaggcctgag
gtcctgggtagcgagatggcggggaataatacgacgcagttggtggtgaagagtgagggc
ggtgtggagagtgcgggtaaagtggaggttggggctgcgtcgtga
DBGET
integrated database retrieval system
