Bipolaris sorokiniana: COCSADRAFT_34190
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Entry
COCSADRAFT_34190 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03082
ATP-dependent chromatin remodeling
bsc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_34190
03083 Polycomb repressive complex
COCSADRAFT_34190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_34190
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
COCSADRAFT_34190
Histone modification proteins
HAT complexes
HATB complex
COCSADRAFT_34190
HDAC complexes
Sin3A-HDAC complex
COCSADRAFT_34190
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
COCSADRAFT_34190
PRC2.2
COCSADRAFT_34190
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
COCSADRAFT_34190
Heterochromatin formation proteins
Other heterochromatin formation proteins
COCSADRAFT_34190
Chromatin remodeling factors
NuRD complex
COCSADRAFT_34190
NuRF complex
COCSADRAFT_34190
NuRF complex (fruit fly)
COCSADRAFT_34190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
WD_LRWD1
MIOS_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
19137505
NCBI-ProteinID:
XP_007696561
JGI:
Cocsa1_34190
UniProt:
M2SJJ8
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MDETMSDAHDSHEMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFREPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDSIKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDLKSGFSKSNKTLSPTATYTVHSATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMETHKKALYRKEAHEDAVNCISFHPEFESTFA
TGSADKTVGIWDLRNFDKKLHSLQSHRADVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKSVTHGEVSD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacaatgagtgacgcccacgattcccatgagatggacgaccaggagcaggtc
gagcagaagattatcaacgaagagtacaagatatggaagaagaactctgtatttctctat
gatatgctgtacggccgcgcgctcgagtggccgacgctcaccacacaatggcttcccgac
aagaagccagtcgaaggcacaaacatgagccagcaccgcgtcatcctcggcacccacacc
tcgaaccaagcgcaaaactacctccagatcgcccactgcgagatacccgattttcgcgag
cccgacctgtcagagctcaacgaagagcgaggggagattggcggacacggaaatgccaag
cggccctttgacttcaagattgtacaaaagatcaaccacccaggcgaggtcaacaaggcg
cgataccagccccaaaacccagacataatagcatctctatgcgtagacggcaaagtactg
gtattcgaccgaaccaagcacccccttcaacccaaagacgattctatcaagttcgaagcc
gagctggtcggccacagcaaggagggtttcggtctaagctggagtcccctcaaagaaggc
cacttggtaaccggaaacgaagacaccacagttaagacctgggacctcaaatccggcttc
tcaaagagcaacaaaaccctcagccccaccgccacctacaccgtccacagcgcaaccgta
aacgacgtccaataccaccccatccacaacttcctcatcggcaccgcctcggacgacctc
acctggcaaatcatcgacacccgcatggaaacccacaagaaagccctctacagaaaagaa
gcccacgaagacgctgtaaactgcatttcattccacccagaattcgaaagcacattcgct
acgggctcggcggacaaaacagtcggtatttgggacttgcgcaatttcgataagaagctg
catagcctccagagtcaccgcgccgacgtcatcgggctacagtggcacccgcaggacgct
gctatcctcgcgagttccagctacgatcgccgtatttgcctctgggatctcagcaagatt
gggtccgagcagacggaggaagaggcggaagatggaccgcccgagttattgttcatgcac
ggcggtttcacaaacaggatctgcgactttgattggaataagaatgatccatggcttatg
atgggtgcggcggaggataaccagttgcagattttccggccctcgcggaagcttgtagag
ccgcttaagaagagtgtgactcatggggaggtgtcggattga
DBGET
integrated database retrieval system