KEGG   Bipolaris sorokiniana: COCSADRAFT_34190
Entry
COCSADRAFT_34190  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03082  ATP-dependent chromatin remodeling
bsc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    COCSADRAFT_34190
   03083 Polycomb repressive complex
    COCSADRAFT_34190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bsc03036]
    COCSADRAFT_34190
Chromosome and associated proteins [BR:bsc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     COCSADRAFT_34190
  Histone modification proteins
   HAT complexes
    HATB complex
     COCSADRAFT_34190
   HDAC complexes
    Sin3A-HDAC complex
     COCSADRAFT_34190
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     COCSADRAFT_34190
    PRC2.2
     COCSADRAFT_34190
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     COCSADRAFT_34190
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    COCSADRAFT_34190
  Chromatin remodeling factors
   NuRD complex
    COCSADRAFT_34190
   NuRF complex
    COCSADRAFT_34190
   NuRF complex (fruit fly)
    COCSADRAFT_34190
SSDB
Motif
Pfam: WD40_Prp19 WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st WD_LRWD1 MIOS_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 19137505
NCBI-ProteinID: XP_007696561
JGI: Cocsa1_34190
UniProt: M2SJJ8
LinkDB
Position
Unknown
AA seq 433 aa
MDETMSDAHDSHEMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFREPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDSIKFEA
ELVGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDLKSGFSKSNKTLSPTATYTVHSATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMETHKKALYRKEAHEDAVNCISFHPEFESTFA
TGSADKTVGIWDLRNFDKKLHSLQSHRADVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKSVTHGEVSD
NT seq 1302 nt   +upstreamnt  +downstreamnt
atggacgagacaatgagtgacgcccacgattcccatgagatggacgaccaggagcaggtc
gagcagaagattatcaacgaagagtacaagatatggaagaagaactctgtatttctctat
gatatgctgtacggccgcgcgctcgagtggccgacgctcaccacacaatggcttcccgac
aagaagccagtcgaaggcacaaacatgagccagcaccgcgtcatcctcggcacccacacc
tcgaaccaagcgcaaaactacctccagatcgcccactgcgagatacccgattttcgcgag
cccgacctgtcagagctcaacgaagagcgaggggagattggcggacacggaaatgccaag
cggccctttgacttcaagattgtacaaaagatcaaccacccaggcgaggtcaacaaggcg
cgataccagccccaaaacccagacataatagcatctctatgcgtagacggcaaagtactg
gtattcgaccgaaccaagcacccccttcaacccaaagacgattctatcaagttcgaagcc
gagctggtcggccacagcaaggagggtttcggtctaagctggagtcccctcaaagaaggc
cacttggtaaccggaaacgaagacaccacagttaagacctgggacctcaaatccggcttc
tcaaagagcaacaaaaccctcagccccaccgccacctacaccgtccacagcgcaaccgta
aacgacgtccaataccaccccatccacaacttcctcatcggcaccgcctcggacgacctc
acctggcaaatcatcgacacccgcatggaaacccacaagaaagccctctacagaaaagaa
gcccacgaagacgctgtaaactgcatttcattccacccagaattcgaaagcacattcgct
acgggctcggcggacaaaacagtcggtatttgggacttgcgcaatttcgataagaagctg
catagcctccagagtcaccgcgccgacgtcatcgggctacagtggcacccgcaggacgct
gctatcctcgcgagttccagctacgatcgccgtatttgcctctgggatctcagcaagatt
gggtccgagcagacggaggaagaggcggaagatggaccgcccgagttattgttcatgcac
ggcggtttcacaaacaggatctgcgactttgattggaataagaatgatccatggcttatg
atgggtgcggcggaggataaccagttgcagattttccggccctcgcggaagcttgtagag
ccgcttaagaagagtgtgactcatggggaggtgtcggattga

DBGET integrated database retrieval system