Bipolaris sorokiniana: COCSADRAFT_342003
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Entry
COCSADRAFT_342003 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 3 protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00040
Pentose and glucuronate interconversions
bsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCSADRAFT_342003
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCSADRAFT_342003
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Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
19137511
NCBI-ProteinID:
XP_007695115
JGI:
Cocsa1_342003
UniProt:
M2T677
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All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MRFAGLVAAVTALLPTALACNGYTGGVPAAVGTKTNSKVIEIAAGQTFDGKWYRYDRGSG
ACSGQTEGGASDAVFLLKEGATLRNVIIGKNQAEGVHCQGHCRLEYVWFEDVCEDAISIK
SDKAGKESWIIGGGAYHASDKVVQHNGCGTVNIINFYVNNYGKLYRSCGNCSTQCKRNVY
IEGVTAVKGNELAGINSNYGDTATLRNVCSDAKVKCQMYTGCAGGCEPQKAGVCSG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgccggactcgtcgctgccgttacggctctgcttcctactgctcttgcctgc
aatggatacactggaggtgtacctgccgctgtcggcaccaagaccaacagcaaggttatt
gagattgcagctggccagacctttgacggtaaatggtacaggtatgatcgtggtagcggt
gcctgctccggtcagaccgagggaggagcttcggacgctgtattcttgctgaaggagggt
gcaactctccgcaacgtaatcattggcaagaaccaggccgaaggtgttcattgccagggc
cattgccgtctcgagtatgtctggttcgaggacgtctgtgaggacgccatctccatcaag
tcggacaaggcgggcaaggaatcttggattatcggtggcggtgcctaccacgcctcagac
aaggttgttcagcataacggctgcggtaccgttaacatcatcaacttttacgtcaacaac
tacggcaagctttaccgctcttgcggaaactgctccacgcaatgcaagcgtaacgtttac
atcgagggtgttactgccgtcaaaggaaacgaactggccggtatcaacagcaactacggc
gacactgctactctgagaaacgtctgctctgacgcaaaggtcaagtgccagatgtatact
ggttgtgctggtggttgcgagccacagaaggctggtgtttgctctggctaa
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