Bipolaris sorokiniana: COCSADRAFT_34463
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Entry
COCSADRAFT_34463 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_34463
Enzymes [BR:
bsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
COCSADRAFT_34463
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
COCSADRAFT_34463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
19137669
NCBI-ProteinID:
XP_007696618
JGI:
Cocsa1_34463
UniProt:
M2SZD4
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MGQGRRMKKQGIPEPLDESLVTRKRKDAPAPAEPERKKRSRTAAREAREAKAKAQPKTRV
AGKPVKTAAAVVNGAKAKAKAAKAAPPPPSDDDDDEDVSEDDSEMMDDSDINVTGLDALG
SASEGEESIDEDEFDSDIVDSDTDIRKGAAMWSEDEDDSDAEEKLTAANIAGLSRKLDEQ
KAIEEAEAQAELEENMQTNIVGERPKILEDEEDEDGRPITNLVNQDIQLLRTRLTDTIRV
LDDFKNLAEEGRSRAEYRASLLKDICAYYGYSEFLADKLLSLFPPREAQAFFEANETPRP
IVIRTNTLRTHRRDLAQALINRGVQLEPVGKWSKVGLQIFDAQVPLGATPEYLAGHYILQ
AASSFLPVMALAPQENERVLDMAAAPGGKTTHLAALMKNTGCIFANDANKDRAKGLIGNI
HRLGARNVIVSHYSALEFPRVMSGFDRVLLDAPCSGTGVIAKDASVKTNKTEADFMKLPH
LQKQLLLAAIDSVNHHSKTGGYIVYSTCSVTVEENEQVVQYALNKRPNVKLVETGLTFGK
EGFTRIGGKTFHPSMKMTRRYYPHTYNVDGFFVAKFKKIGPTPPNAIGANEATKANGAGN
SDTITEVEIVDRTPIGADSDEESDFGGFDEEEDQKYIEKAQAKSMRKKGKDPRAIVPKAE
KSTNGVSKEKNGNLSAKEKAGRKEKKGGGVEVATEVTTKEKSNGVKAKETKVESKKGRRK
SGEKKGKA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaggtcgccgtatgaagaagcagggcattcctgagcccctcgatgaatcgctg
gtaacaaggaagcgaaaagatgcgcctgcgcctgctgaaccagagcgcaagaagagaagt
aggacagctgctcgggaagctagagaggccaaggcgaaagctcagcccaagacaagagtc
gctggaaagcccgtaaagacggccgctgctgttgtcaatggagcaaaggccaaagcaaag
gccgcaaaggccgctccgcctccaccgtccgatgacgacgacgacgaagacgtttccgaa
gacgactctgaaatgatggatgattccgatatcaacgttaccggactcgatgcgctcggt
agcgcgtccgagggcgaagagtcaatcgacgaagacgagtttgactcggatattgtagat
tcagataccgatatcaggaagggcgctgcgatgtggtcagaggacgaagacgactcggat
gccgaggagaagcttacggcagccaacattgctggactgtctaggaagttggacgagcaa
aaagcaattgaagaggccgaggcgcaagctgaattggaagagaacatgcagaccaatatt
gttggggagaggccgaagattcttgaggatgaggaagatgaagatggcaggccgatcacg
aacctcgtcaatcaggacattcaattgctaaggacaagattgaccgacactattcgtgtt
ttggatgatttcaagaatctggctgaggagggccggagcagggcagagtatagggcgtcg
cttctcaaggatatttgcgcttactacggctactccgagtttctagcagacaagcttctg
agccttttcccgcctcgcgaagctcaagctttcttcgaggccaacgaaactccacgaccc
atcgtcatccgtaccaacaccctccgtactcaccgaagagaccttgcgcaagcactcatt
aaccgtggtgtgcagctcgagcctgtcggtaagtggtcaaaggtcggacttcagatcttc
gatgcacaagtaccgctgggtgctactccggaatatctcgctggacactacattctacag
gctgcgtcgtcgttcttgcccgttatggctcttgcgccacaggagaacgagcgagtatta
gatatggctgctgctcccggtggtaaaacaacacatttggcagcactcatgaagaacaca
ggttgtatcttcgccaacgatgccaacaaggatcgtgccaagggtctgataggaaacatt
caccgtctaggcgcgaggaacgtgattgtatcccactactcggctttggagtttcctagg
gtcatgagtggctttgaccgtgtgctgctcgatgcgccttgctcgggtactggtgttatc
gccaaggatgccagtgtcaagaccaataagaccgaagccgatttcatgaagctgcctcat
ctacagaagcaattgttgcttgctgccattgactccgtcaaccatcactccaagactggc
ggctatattgtttacagtacttgttccgttactgtcgaggaaaacgagcaggttgtacaa
tatgcgctcaataagagaccgaatgtcaagcttgttgagactggccttacttttggtaag
gagggtttcacaaggattggagggaagactttccatccctcgatgaagatgaccaggagg
tactaccctcacacttacaatgtcgacggtttctttgtcgccaagttcaagaagattggc
cctacgccacccaatgctattggcgccaacgaggctaccaaggccaacggtgcaggtaac
tcagacacaatcaccgaggttgaaatcgtggatcgcactcccatcggcgccgatagcgac
gaagaatcggactttggcggatttgatgaggaagaggatcagaagtacattgagaaagct
caggctaagtcgatgcgcaagaaaggcaaggatcccagggctattgtgccaaaggcggag
aagagtacgaacggagtatcaaaagagaagaatggcaatctgagcgcaaaggagaaagcg
ggtcgcaaggagaagaagggcggcggtgttgaagtcgcaactgaggttacgacgaaggaa
aaatccaacggtgttaaggcgaaagagacaaaagtcgaatcaaagaaggggcgaagaaag
agtggggaaaagaagggtaaggcgtag
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integrated database retrieval system
