Bipolaris sorokiniana: COCSADRAFT_35564
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Entry
COCSADRAFT_35564 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00100
Steroid biosynthesis
bsc00909
Sesquiterpenoid and triterpenoid biosynthesis
bsc01100
Metabolic pathways
bsc01110
Biosynthesis of secondary metabolites
Module
bsc_M00102
Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
COCSADRAFT_35564
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
COCSADRAFT_35564
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bsc01006
]
COCSADRAFT_35564
Enzymes [BR:
bsc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
COCSADRAFT_35564
Prenyltransferases [BR:
bsc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
COCSADRAFT_35564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
PRIMA1
Motif
Other DBs
NCBI-GeneID:
19138381
NCBI-ProteinID:
XP_007698345
JGI:
Cocsa1_35564
UniProt:
M2RFJ2
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSSLGFLYYAVHPAELRSIIQWKVWHNPVHERDESKEPESLKRCFHFLNQTSRSFAAVIL
ELHPDLLVPVTLFYLILRGLDTIEDDMTIPLAKKEPLLRNFQDILEQDGWTFTENGPNEK
DRQLLVEFNVVIEEFKKIKPAYKDIIKDITRRMGNGMADYANNAEFNAGVKTIKEYELYC
HYVAGLVGEGCTRLFVEAGLANAALLKRPELMESMGQLLQQVNITRDIREDFDDGRRFWP
KEIWSKHVDNFEDLFKPENKEKALKASSEMILTALTRADDCLYYLAGLREQSVFNFCAIP
QSMAIATLEACFQNYDLFQKNVKITKGEACQLMVESTQNLQLVCEVFRRYARKIAKKNNP
HDPNFLKISITLGKIEQFIESIFPSQQPPPDRKAPATIEEAMKKQKEDAEANWDLIYVVA
AVIGTVLVMTSLMLFIAYLAGARFDIAWSQAKTDIGKLLGGAASTAPAQVTKVLETVEKS
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagttccttgggcttcctctactacgccgttcacccagctgaattgcgctccataatt
caatggaaagtatggcacaatccagtacacgagcgcgacgaatcaaaggaacccgagtcc
ctaaagcgatgcttccacttcctcaaccaaacaagccgtagttttgccgccgtcatcctt
gagttgcaccctgatcttttggtacccgtcacactattctacctaatcctgcgtggtctc
gatacgattgaggatgacatgaccatccccttggccaagaaggagcctctcctacgcaac
ttccaggatatactggaacaggacggttggacatttacggaaaatggccctaacgagaag
gacaggcagcttctggtcgagttcaacgtagtcattgaggaattcaaaaagatcaagccc
gcctacaaggacatcatcaaggacatcaccaggcgcatgggcaacggaatggcagactac
gccaacaacgctgagtttaatgctggagtcaagacgatcaaagaatacgagctgtactgc
cactacgtcgcgggcctggttggtgagggatgcacacgtcttttcgtcgaggctgggctg
gcaaatgccgccctgctcaagaggccggaactcatggagtccatgggccagctcctccag
caggtcaacatcactcgtgacatcagagaggacttcgacgacggccgccggttctggccc
aaggagatctggtccaagcacgtggacaatttcgaggacctgttcaagccggaaaacaag
gagaaggcactgaaagctagttcagaaatgattctgacggcgttgactcgtgcagacgac
tgcttgtactatctagccggtctccgagagcagagtgtgttcaacttctgcgcgatcccc
cagtccatggccattgcaactctggaagcctgtttccagaactatgatcttttccaaaag
aacgtcaaaattaccaagggcgaggcttgccagttgatggtcgaatctacacaaaacttg
cagcttgtctgtgaggtttttaggcggtatgctcgcaagattgcgaagaagaacaaccca
cacgatcccaatttcttgaagatcagcattacattgggaaagattgagcaattcatcgag
tcgatattcccatcgcaacagcctccacccgaccgcaaggcaccagccaccatagaagaa
gcaatgaagaagcagaaggaggatgcagaggccaactgggacctgatctatgttgtcgcg
gctgtgattggaactgtccttgtcatgacttcgctgatgctgttcatcgcctacctcgca
ggcgcccgcttcgatattgcctggtctcaggccaagacggacattggcaaacttctaggc
ggagcagctagtacggcacctgcgcaagtcactaaagtcctggagaccgtggaaaagagc
gaactatag
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