Bipolaris sorokiniana: COCSADRAFT_357417
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Entry
COCSADRAFT_357417 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
COCSADRAFT_357417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_357417
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
COCSADRAFT_357417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP-eEF1A_C
Roc
Ras
SRPRB
Septin
Motif
Other DBs
NCBI-GeneID:
19138497
NCBI-ProteinID:
XP_007700226
JGI:
Cocsa1_357417
UniProt:
M2SAS3
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MPPKSGFSRTRNVDYDDDDLYDDDYYEEEGDDGGAGDGMSEEDKEQMRIGTIRVREAMGD
MSDFTSDKQIQEALWHYYYDVGKSVSYLKNKLGIAEPKKEAPKQEKAKLASRFDQAASVA
HQNAPASTGKQTHMRSSYRYQPARLVAHHLPLPPLSMPTNAAVTDFFWDMPWGNVPPERL
ANITIEAPECKGGLLGGSSKLAALAAKRRKEREEAEAAASKANSDADSAVAMLDKLSVKN
QENVNSLHDAVASHPARLSKYPVRRRSPSPAPETPKEPEIKEPQLPQPAIVVESPAQRAI
ASMFASTLCGSDKPSKQPQLHVQELPMPFAAYKSFDGTKAFSEPSPDDIKKKQANGDLTE
SVEKLSVADEPKVKSKNLNVVDEFEKSNMKRLANFVVVGHVDHGKSTLMGRLLYDLKVID
QRSIDKLRKEAETIGKSSFALAWVMDETSEERSRGVTVDIATNYFETEKTRFTILDAPGH
KDFIPNMISGASQADFPILVIDASTNSFESGLKGQTKEHVIIARSMGMQHIIIAVNKMDM
IGWSKSRFDEIVKRMTAFLTEASFLEKRITFIPLAGLTGENVVKKIENSAAHWYTGETLL
EALERIEIPQRNLQKALRLSVADVFKGDMRSPLSISGRIDSGTLQVGDVILTLPANETAT
IKSIEVQDAPVDWAVAGQIPTLHLTDIDPVHLRQGDIICAPKDPVKLVKAFTSKLLAFEH
VLPMPVEVFRSTLNSPGSIRTLSARLNKFTGEVMKKKPRIVKPGEVARIVVQLERELPIE
EGMRVVLRERGRTVGAGLMENVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaagcggtttctcgcgcacgcgcaacgtcgattatgatgacgatgacctc
tacgacgacgactattacgaggaagaaggcgacgatggtggcgcgggagacggcatgtcg
gaagaagacaaagagcagatgcgcatcggcacaatacgggtgcgcgaagcaatgggagat
atgagtgatttcacaagcgacaagcaaatacaagaagcgctgtggcactactactatgac
gtgggcaagagtgtgagctacttgaaaaacaaactggggattgcagagcccaagaaggag
gcaccgaaacaagaaaaagccaaactagcatcgcggttcgaccaggctgcaagcgtcgct
caccagaatgcgcccgcatccacaggtaagcaaactcacatgaggtctagctatagatac
cagcccgctcgtcttgttgcccatcacctaccgctgcccccactgtcgatgcctaccaac
gctgctgtcacagactttttctgggatatgccttggggcaatgtaccacctgagcgactg
gccaatatcaccattgaagccccagagtgcaaggggggattgctcggaggctcttcaaag
ctagctgcgctcgcggctaagcgcaggaaggagcgagaagaggccgaagctgctgcctcc
aaagccaatagcgatgcggactcggctgttgcgatgctcgataagctttcggtcaagaat
caggaaaacgtcaactctttgcatgacgcagttgcgagtcacccagctcgattgtctaaa
taccctgttcgaagacgatcgccttcgccagcaccagaaacaccaaaagagcctgagatt
aaagagccccaactccctcagccggccattgttgtcgagtctccagctcagcgtgctatt
gcttccatgtttgcttcgactctctgtggttccgataaaccgtcaaagcagccgcagctc
cacgtccaagagcttccaatgccatttgctgcctataagtcatttgatggcacaaaagcc
ttctcggaaccaagtccggacgatatcaaaaagaagcaggctaatggcgatcttaccgag
tccgtcgagaagctctctgttgccgacgaaccgaaggttaagagcaagaacttgaatgtt
gtggatgaatttgagaagagcaacatgaaacgactggcgaattttgtggttgttggacat
gtcgaccacggcaaaagcacactgatgggccgtttgctgtatgatctcaaagtcatcgac
cagcgatcaatagacaagctacgaaaggaagccgagactattggaaaatcgtcttttgca
ttggcctgggtcatggacgaaacaagcgaagaaagaagtcgtggtgttacagttgacatt
gcaacaaactactttgagacagagaagacacggttcacgatattagatgctcctggccac
aaggactttatcccaaacatgatatcaggggcgtcgcaggccgacttccccatcctggta
attgacgccagcaccaatagtttcgagtctggcctcaagggtcaaaccaaggaacatgtc
ataattgcacgaagcatgggcatgcaacacattatcatcgctgtgaacaagatggacatg
attggatggtctaaatctcggttcgacgagatagtaaaacgcatgacggcgttcctgacc
gaagcaagtttcctggagaaacgaattaccttcatcccgctggcgggtcttacaggcgag
aatgtcgtcaagaaaattgaaaactctgccgctcattggtatactggtgagacattactc
gaggccctagagcgcatcgaaataccgcaacgtaacctccaaaaagcacttcgcctctct
gtcgctgatgtattcaagggtgacatgcgttcaccgctcagcatatccggacgaatcgac
tctggaacactacaagtaggtgacgtaatcctcacccttcccgccaacgaaaccgcgaca
atcaaatccatcgaagtccaagatgcccctgtagactgggcagtcgcaggccaaatcccc
acactacacctcacagacattgaccccgtgcatcttcgccaaggcgacattatctgcgcc
cccaaagacccagtcaaactcgtcaaggcattcacttctaaactcctggctttcgagcat
gtgctacccatgccggtagaggtgtttcgcagcaccctcaactcgcctggtagcattcgc
acgctcagtgcccgcttgaacaagttcacgggcgaggtcatgaagaagaagccaaggatc
gtgaagccgggtgaggtggcgaggattgtggtgcagcttgagagggagttgccgattgaa
gagggcatgagggttgtgcttagagagagggggaggacggtgggggcggggcttatggag
aatgttgcttag
DBGET
integrated database retrieval system
