Bipolaris sorokiniana: COCSADRAFT_36193
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Entry
COCSADRAFT_36193 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12822
RNA-binding protein 25
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_36193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_36193
Spliceosome [BR:
bsc03041
]
Complex A
U1 snRNP components
U1 related factors
COCSADRAFT_36193
Complex B
COCSADRAFT_36193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
19138683
NCBI-ProteinID:
XP_007699120
JGI:
Cocsa1_36193
UniProt:
M2T6F5
LinkDB
All DBs
Position
Unknown
AA seq
751 aa
AA seq
DB search
MYGYPGAPGYNGPPGYAGAPPGMAPPGMGPPGAAAPPGVAPPPGVANAQMPPTANGSRAL
PSGWQPPASMPNFNFNAPVIRLGTQGGRPGAADSPVGGRRDNAAPPTRRGLGMDRDGDRR
DGPQPVNPPTREEIARTIFVGNIPDGVGGDEGMERILETAGKLVRWTRATDANNKPQTFG
FAEFADAQSLETAAEIFKDIRVPTKRQKPGGAAKKEDGEEEEVETTKLHIMVDDASIKYA
EEWSKTRNEDEATVQFRLDSAKEALSSVLASFFNPPNAPNMDYASDTVMQDAPTQDGEDV
EVAFVNLATGEDELADIPAEMREVVAAEIAAFRDRSNQRDRDRLRREEELEAEERRRSGR
RATPPSSAPSGPGNANGVPLGPRAERGVQGAPSGPKGSQFPRDYQAGVNFVNGGAVNNGV
YVSREDDDDSASDSELERRRQKKRNDEAEEAYKKQLHRWLNTERRTVASLDRTNDYFKNM
DAEREKARVAQSKQLREFDDDQEAASRRDLYYRDHSDWIREREKVRGLEAKEDAIDRDQE
RREMAAQKRQQDHARGQADAFLEEQGEELMRREEQREPAHFKISLGAAAKKLEQTAAPRR
TAADVENLLEDEDLTDQPGSKKRTLIPINFDAAVRANLTQEEIEEAQRQLARDIPNDKEG
LWNWAVSWEHLPEKNINKDIKEWAANKVLEIMGVQEEMLVDAIVEHLKSRGAPQPLVENL
EVALDEEAEALVKKLWRMVIYYSETEKRGIK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacggttaccctggtgctccgggctacaatggacctccaggctatgcaggagctccg
cctggcatggcccctcctggaatgggtcctccaggcgctgcagctccccctggtgtagca
cctccgccaggtgtcgcaaacgctcagatgcccccaacagcaaacggatcccgcgccctt
ccatccggctggcagccacccgcaagcatgccaaacttcaacttcaacgcgcccgtcatc
cgcctgggaacacaaggaggtcgtcctggcgcggccgacagcccagtaggcggccgcaga
gataatgcagcaccacccactcgtcgtgggcttggtatggacagagatggcgatcgccga
gatggacctcaacccgttaatccacccactcgtgaggaaattgccaggaccatttttgtt
ggcaacatcccggatggcgttggaggtgatgagggcatggagcgcattctagagacggca
ggaaaactggtccggtggacgagggcaaccgatgccaacaacaagccccagacattcggt
ttcgcagaatttgccgacgcgcagagcttggaaacagcggcagagatcttcaaagatatc
cgtgtacccacaaagcgccaaaagcccggaggcgcggcaaagaaagaggatggcgaagag
gaagaggtcgagactaccaagttgcacattatggttgacgatgcctcgatcaaatatgcc
gaagaatggagcaagactcgaaacgaagatgaggctacagttcagttccgccttgatagc
gcaaaggaagccctttcctcggtcctcgcaagcttcttcaacccgcccaatgcgcccaac
atggattacgcaagcgatacagtcatgcaagacgcgccgacacaagatggcgaggatgtc
gaagttgcgtttgttaacctcgctactggagaggacgagcttgcagacattccagccgaa
atgcgcgaggtggtcgccgccgagatagccgccttccgcgaccgttccaaccagcgcgac
cgcgaccgtctacggagggaagaggagctcgaggccgaagaacgtcgccgcagtggtcgg
cgcgcaacgccaccatcctctgcccctagtggacctgggaatgctaacggtgtaccattg
ggtccaagggcagaacgaggtgttcagggtgcccccagcggacccaagggatcgcaattc
cctcgcgactatcaagctggcgtcaactttgtgaatggcggtgccgtgaacaatggcgtc
tatgtttcccgggaagatgacgatgattccgccagcgactctgaacttgagcgccgccgt
caaaagaagcgtaacgacgaagctgaagaagcgtacaagaagcagcttcatcgatggctc
aacacagaacgccgtactgtggcctcgcttgatcgtaccaacgactacttcaagaatatg
gatgctgagcgtgagaaggctcgtgtcgcacagtctaagcaactccgggagtttgatgac
gaccaagaagcagcttccaggcgcgatttatactaccgcgatcacagcgattggatccgt
gagcgcgagaaggttcgtggcctcgaagctaaggaagacgccatcgatcgagaccaggag
cgacgcgaaatggcggcccagaagcgacagcaagaccatgctcgtggtcaagccgatgct
ttcctggaagagcaaggcgaggaactgatgcgcagggaggagcaacgcgagccagcacat
ttcaagatttctctcggtgcagctgccaagaagctcgaacagactgctgctccccgtcgc
accgccgccgacgtcgaaaatcttctcgaggatgaagatctcaccgaccaacccggttcc
aagaagcgaacacttatccccatcaacttcgatgctgctgttcgcgccaatcttacccaa
gaagagattgaggaagctcagcgacaacttgcacgtgacattcctaacgacaaggaaggc
ctctggaattgggccgtctcttgggagcacttgcctgagaagaacatcaacaaggatatt
aaagaatgggctgccaacaaggttcttgagattatgggcgttcaagaagaaatgcttgtc
gatgctattgttgaacacttgaagagcagaggcgcaccacagcctttggtggagaatctg
gaagtggccctcgatgaagaagcagaagctctggtcaagaagctttggcgcatggtcatc
tactacagtgagactgaaaagagggggatcaagtag
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