Bipolaris sorokiniana: COCSADRAFT_36481
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Entry
COCSADRAFT_36481 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10609
cullin 4
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03420
Nucleotide excision repair
bsc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCSADRAFT_36481
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_36481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bsc04121
]
COCSADRAFT_36481
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_36481
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bsc04147
]
COCSADRAFT_36481
Ubiquitin system [BR:
bsc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
COCSADRAFT_36481
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
COCSADRAFT_36481
TCR (transcription coupled repair) factors
Cul4-CSA complex
COCSADRAFT_36481
Exosome [BR:
bsc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
COCSADRAFT_36481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
19138741
NCBI-ProteinID:
XP_007699178
JGI:
Cocsa1_36481
UniProt:
M2REG4
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MSANSSALKRKHSGKTIKELFTTHSKPNLASAAPLSPTSKRTRRDSSPIESTEVATSPSL
ISSMDTADMYSFPSKKAGISSNANVVHITSSPENSPAKTSGQRNGTRRAAPSLHSNSGPK
RLVVKNFKPIRKVDPRAFLDQTWQKVEKALDTIFEQGDIDFSLEELYRGVENVCRQDMAR
DIKERLTNKCRDYVRGSLEAKVKDSLGKTSVDVLRTTLHAWALWNSQMKYLDWIFCYLDR
AYLLPRHESLREICISLFRSIIFENDKLNPRIVDGACDLVATDRTGGDLDSEIFSKTVNM
FHDMQVYTRHFEPRLMEVSQEYIVKWADTESAEKSLPEYVRNSRALMDREMKRVEMFSLP
NTTKRELLTLLEDHLIAKKESRLTNQDELADLLENNAVQDLEMLYTLLERRKMGARLRSG
FTKWIEDEGTAIVFNEKEQENMVVQLLSLKRQLDAIWKTSFHRDEELGHGLREAFDKFMN
KTKKTNASWGTDNSKTGEMIAKYVDMLLRGGAKAIPTQLSRKSEKPVEVEAEDDKEDDVF
DEDTEVNNQLDQVLDLFRFLHGKAVFEAFYKKDLARRLLMGRSASADAERSMLSRLKIEC
GAGFTANLEQMFRDIELSREEMSSYKNISEERNEKLDLDLNVNILSASAWPTYPTVPVIL
PPEVQSAMNKFEAHYKIKHTGRKLEFKHALAHCQIKARFPKGLKELVVSSFQAIVLLLFN
GRRDDEHIDYEYLKQATGLPPAELNRTLQSLACAKVRPLTKHPKGREISETDTFTINASF
TDPKYRIKVNTVQLKETAAENKETHERVAADRNYETQAAIVRILKARKRISHAELVSETI
KATRNRGTLEVSGIKRNIDRLIEKEFLEREDDGLYAYIA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaattcaagcgcgctgaaacggaagcactcgggcaagaccatcaaggagctc
ttcaccacccactccaagccaaaccttgcctcggcagctccgttatcgcccacaagcaag
cgcacacgacgagacagctcgcccatagagagcacagaggttgctacttcgccctctttg
ataagcagcatggatacggccgatatgtacagctttcccagcaagaaggcaggcatatct
agtaatgcaaatgtcgttcatatcacctcgagccctgagaacagccctgcgaagacgagc
ggccaacgcaatggaacgcgcagggcagcacccagcttacatagcaatagcggccccaag
cgactggtggtaaagaatttcaagccgattagaaaggtggacccccgtgcttttctggac
cagacatggcagaaggtcgaaaaggccctcgacaccatctttgagcaaggcgacattgac
tttagtctggaggagctgtaccgcggcgtagaaaatgtctgtcgacaggatatggccagg
gacatcaaagaacgtctaaccaacaagtgccgagattacgtgcgaggcagtttagaggca
aaggtaaaagacagcctgggtaagactagtgttgacgtactgcggacgacgctacatgct
tgggcactatggaacagtcagatgaaatacctagattggatcttctgctacctcgaccga
gcctacctcctcccacgtcacgaatccctccgtgaaatctgcattagccttttccgctca
atcatctttgaaaatgacaaactaaaccctcgcatcgtcgatggtgcctgcgatctggta
gcaactgatcggacaggcggtgatctggacagcgagatattctccaagacagtcaatatg
ttccacgacatgcaagtctacacacggcactttgagccgcgcttgatggaagtcagtcag
gagtacatagtgaagtgggcagacacggagagtgcagagaaatccctgcccgagtatgtg
cgcaattcaagggcgctcatggatcgtgaaatgaagagggtagagatgtttagccttcca
aacacgaccaagcgagagcttcttacgctgctggaagatcatctaatcgcgaagaaggaa
tcaagattgacgaatcaggacgagcttgctgacctcctggaaaataatgctgtccaagat
ctcgagatgctatacacacttctcgaacgccgaaaaatgggtgcacgtctacggtctggt
tttacaaagtggatagaagacgagggtacagctatcgtcttcaatgaaaaggaacaagag
aacatggtcgtgcaactgctgtcattgaagcgtcagttagacgccatttggaaaacctcg
ttccatcgagacgaagagctgggccacgggctgcgcgaggcttttgacaagttcatgaat
aagacaaagaagacgaacgcaagctggggcacagacaactccaagacgggcgagatgatt
gccaagtacgtcgacatgttgctgagaggaggtgctaaggcgataccaacacagctgagc
cggaagtcagagaagcctgttgaagttgaggctgaggatgacaaggaagacgatgtattt
gatgaagacactgaagtcaacaaccaactcgaccaggttctcgatctgttccgcttctta
catggcaaggctgtgtttgaggccttctacaagaaagatctagcacgacgattattgatg
ggcagaagcgctagtgcggatgcggagagaagcatgttatcaagactcaagattgaatgt
ggtgctggtttcactgctaatcttgaacaaatgttccgagacatcgaattgtcccgcgaa
gaaatgagctcatacaagaatatcagcgaggaacgcaacgaaaaactcgatctcgatctg
aatgtgaacatcctttctgcgtccgcttggcctacttaccccactgttcccgtcatccta
ccgccagaggtacaatctgctatgaacaaattcgaagcgcactacaagattaaacatact
ggccgcaagcttgagttcaagcacgcactggcgcattgtcaaatcaaggccagattcccc
aaaggcctcaaggaactggtagtctcgtcattccaggccattgtcctcttgctgttcaat
ggccgacgggatgacgagcacattgattatgaatatctcaagcaagccacaggactacca
cctgccgagcttaatcgtacattacaatctctggcttgtgccaaagtgcggcctctaacg
aagcacccaaagggccgcgagattagcgagactgatacgttcactatcaacgcttctttc
acagatcccaagtaccgcatcaaagtcaatactgttcagctcaaggaaacggcggctgaa
aacaaggaaacacacgaacgtgttgctgcggaccgaaactatgagacgcaagctgccatt
gtgcgcatcttgaaggcaagaaagagaatcagtcacgccgagctagtcagtgagactatc
aaggctacaagaaacaggggtactctagaggttagtggtatcaagaggaatattgatcgg
ttgattgagaaggagttcttggagagagaagacgatggattgtatgcctacattgcatag
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integrated database retrieval system
