Bipolaris sorokiniana: COCSADRAFT_36564
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Entry
COCSADRAFT_36564 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSADRAFT_36564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_36564
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
GTPases
COCSADRAFT_36564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
D123
Motif
Other DBs
NCBI-GeneID:
19138758
NCBI-ProteinID:
XP_007699195
JGI:
Cocsa1_36564
UniProt:
M2SSH9
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MPVVASQKLVALQQAADGIRNICILAHVDHGKTSLTDALIATNGIISPKLAGKIRYLDSR
PDEQLRGITMESSAISLFFSSLRRSAPDATPEHKEFLINLIDSPGHIDFSYEVSTASRLC
DGAVVLVDAVEGVCSQTVTVLRQTWIEKLKPLLVINKMDRLITELKMSPAEAHTHLSKLL
EQVNAVMGSFYQGERMEDDLRWREKMEERLNAAAAAADKTDTRSPSVLENGDSIDMTSTP
AEYEEKDDEDIYFAPEKNNVIFGSAIDGWAFTVRQFASLYEKKLGIKRSILEKVLWGDFY
LDPKTKRVLSSKHLKGRHLKPMFVQLVLDNIWAVYEATTGGNNGKGDATMVEKITKSLNL
NLPAHVMRSRDPRTLLMALFAAWLPLSTALLVSVTEYLPPPSKAQFERMPEIIDTSPGAD
YVDPQVRDAMTNFKTSADAPVVAYVSKMISVPSSELPQNKRRTGALTAEEARELGRKKRA
EIARQQAIANNQDPDVGSVTDALGSSTIEETETPVEEAPAAEEEAEHLIGFSRIFSGSLN
VGDEVYVLGPKFTPANPHAAPEPQKVKITALYLMMGRGLEPLTSVPAGVVFGIGGLEGHI
LKSGTLCSQLPGAVNLAGVQMGSEPIVRVALEPENPYDLDKMIRGLKLLVQSDPCAEYEQ
LPSGEHVILTAGELHLERCLKDLKERFAKCEIQAGEPIVPYRESIIAAAEMNPPKDPNLP
RGTVIGETASKQVSVRLRVCPLPASVTDFLGKNAGAIKKLYSDRRAEDEGGNAEHQEHGT
EDDGIQEAEKREIGQSLSLEEFKKQLKEAFAEAKGQKEVWTDVIEKITAFGPRRIGPNIL
VDATPDSICGKALRDSSSPNPDAEEPSDRTISPRTFSSTIAYAFQLATAQGPCCAEPVQG
IAIFLESVTLNLGEDEGAQQDRGRLTGEVIKAVRSSIHQGFLDWSPRMLLAMYSCEIQAS
TDVLGRVYAVLTRRRGTILSETLSSTSSASTTGSQTFTINALLPVAESFGFSDEIRKRSS
GSASPQLRFAGFEMLDEDPFWVPFTEDELEDLGELADRENVAKRYVDKVRKRKGLRVAGE
KVVVDAEKQKTLKR
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcgttgccagtcaaaagctcgtcgccctgcagcaggctgctgacggcatcagg
aacatctgcatcctggcccacgtcgaccatggcaagacgtccctcaccgacgccctcatc
gccaccaatggcatcatctcccccaagctcgccggcaagatccgctacctcgactcgagg
cccgatgagcagctgcgcggcatcaccatggagtcgtcggccatctccctcttcttttcc
tcgttgcgtcgctccgcccccgacgccacccccgagcacaaggaattcctcatcaacctc
atagactcccccgggcacatagactttagctacgaggtatctacagcatcccgcctctgc
gatggcgccgtcgtgctcgtagatgctgtcgagggcgtctgcagccagactgtcaccgtc
ctgcgacagacatggatagagaagcttaagcctctgctcgttatcaacaagatggatagg
ctaatcacagaactcaaaatgagccctgccgaagcacatacgcacttgagtaaactgctt
gaacaggtaaacgccgtgatgggtagcttctaccaaggcgagcgcatggaggatgacctc
cggtggcgcgagaaaatggaagagcgcctcaatgccgctgccgctgctgctgacaagact
gacacgcgatctccatctgtgctagaaaacggtgacagcattgacatgaccagtaccccc
gccgagtacgaggaaaaagacgacgaagacatttactttgccccagaaaaaaacaacgtc
atcttcggcagtgccattgacggctgggctttcactgtgagacaatttgcaagcctgtac
gagaagaagctgggcatcaagcgctccattctcgaaaaagtcctctggggcgacttctac
ctcgaccccaagaccaagcgtgtccttagctcaaaacatctcaagggccgacacctcaag
cccatgtttgtccaactcgtcttggacaacatctgggccgtatacgaggccactacagga
ggtaacaatgggaagggagatgctaccatggtcgagaagattaccaagtcgctcaacctc
aacctccctgcccacgttatgcgctcccgcgaccccaggactctcttaatggcgcttttc
gcagcctggcttccgctctcaaccgctctcttagtatcggtgacagaatacctacctccc
ccgtccaaagcgcaattcgaacgcatgcctgaaattattgacacctcacccggcgccgat
tacgttgatccacaagtacgagatgcaatgaccaatttcaaaacatcagcagatgcccct
gtcgtagcctacgttagcaaaatgatctcggtaccttcgagcgagctgccccagaacaag
cgaagaactggcgccctgaccgccgaagaggcaagagagttggggagaaagaagagggcc
gagattgcccgccagcaagcaatcgccaataaccaagatccagatgttggcagtgtcacc
gatgctctgggctcttcaaccattgaagaaactgagactccggtagaggaagctccggca
gctgaggaagaggcagaacacctaatcggtttctcgcgtatcttttcgggatctctcaac
gtgggcgatgaagtatacgttctcggtccaaagttcactcccgcaaacccacacgctgca
ccggaaccacaaaaggtcaagatcacggctttatacctcatgatgggccgcggcttggag
cccttgacctcggtacctgcgggcgtcgtctttggaattggtggactcgaaggacatata
ctcaagtcaggtacgttgtgttcacaattgcccggagctgtcaatctggctggtgtccaa
atgggcagtgagccaatcgtccgtgttgccctcgagcctgagaacccctatgatttggac
aagatgatcagaggcttgaaactcctcgttcagagcgacccgtgcgcagaatacgagcaa
ctgcccagtggggagcacgtgattctcactgcgggagaactgcatttggagagatgtttg
aaggatttgaaagaacgattcgccaagtgcgagatacaggctggcgagcccatcgtacct
taccgagagtccattatcgcggcggccgagatgaatccgccaaaggaccccaatctaccc
agaggcactgtcattggtgagacagcaagcaagcaggtgtcagtacgtctacgggtatgt
ccactgccagccagtgtcaccgatttcttgggaaagaacgccggcgctatcaagaaatta
tactcggaccgacgagcagaagacgaaggcggaaatgcagaacatcaggagcatggaact
gaagacgacggcatccaagaagcggagaaacgcgagataggacagagtctcagcttggag
gagttcaagaagcagctcaaagaagcttttgctgaagcaaagggtcaaaaggaagtgtgg
actgatgtgattgagaagattactgcgtttgggcctcggagaataggccccaatattctc
gtggatgcaaccccagatagcatctgcggaaaggcactacgcgattcatcgtctcccaac
ccagacgcagaagagccatcagaccgcacaatatccccacgcaccttttcctcaaccatt
gcctacgctttccagctagccacagcccaaggcccctgttgcgcggagcccgtgcaaggc
atcgccatcttcttagaatccgtgacactgaacctgggcgaagacgaaggcgcacagcaa
gaccgcggccgcctaacgggcgaagtcatcaaagccgtgcgctcatccatccaccagggc
ttcctcgattggtctccccgcatgctcctcgcaatgtacagctgcgaaatccaagcctcg
accgatgtcctgggtcgtgtctacgctgtcctgactcgtcgccgcggcactattctcagc
gaaaccctatcatccacttcctccgcgtccacaacgggatcccaaacattcaccatcaac
gcgctcctccctgttgccgaatcctttggtttcagcgacgagatccgcaagaggagttcg
ggctcggcgtccccgcagctccgctttgcgggtttcgagatgctcgacgaagatcccttc
tgggtcccttttacggaagatgaacttgaagatttgggtgagttggctgaccgcgagaat
gtggcaaagaggtatgtggataaggtaaggaagcgcaagggactccgtgttgcgggcgag
aaggttgtggttgatgcggagaagcagaagacgcttaagcggtaa
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