Bipolaris sorokiniana: COCSADRAFT_37068
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Entry
COCSADRAFT_37068 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_37068
Enzymes [BR:
bsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCSADRAFT_37068
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCSADRAFT_37068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Presenilin
Motif
Other DBs
NCBI-GeneID:
19138887
NCBI-ProteinID:
XP_007699859
JGI:
Cocsa1_37068
UniProt:
M2SQB5
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MKRAHAAPKKAAHKAHKRQKVDDFPKPLPTKTKRRVQLNELGWKAVSMPDRLEDTEGFYG
LEEIDDVEIVKDPVTGAFHFETTKTEDEVARDVEEAWQREEDEARHLEKITFGETQEAEK
DEDKESEEDEGKEPKVQGEDEELEWEGFSDEEIETETPTLATNGESETRKETKKEKNKRL
KEEKLKKQEQKKTNGQMAKSNEQDKADNDEDDDDDDDQFDAEGVDDGETFGPGAFDILAN
QPMDDSDEEDVSAWGKLDLSEEMLGALAKLKFSKPTNIQTSTIPEIIAGRDVIGKASTGS
GKTLAFGIPIIESYLAGRAAPKDTKDKVPLALIIAPTRELAHQINEHLVKLCAKGDFDSP
YIASITGGLSVQKQRRQLEKADIVVGTPGRLWEVISSGQGLLAKFKQIKFLVVDEADRLL
SQGHFKEMDDILKVLEPDDEVDENAEPAETPEANRQTLVFSATFGKDLQRKLAGKAKFGG
DQMNQQQSMEYLLKKLRFREEKPKFIDANPTSQMASKLQEGLIECAGPEKDLYLYSLLMF
YTKKRALVFTNSISAVRRITPFLTNLNLPALPLHSNMPQKARLRSIERFKERPGSILVAT
DVAARGLDIPKVELVIHYHLPRAADTYVHRSGRTARANASGASILICAPEEVAGVRRLIA
KVHARAASAPKTKNTSFFIRTLDIDRRIVSRLKPRATISKRLADTVIAKEKKNSGDDVLR
QAAEDLGVDYDSEEFDKEAKGKRGRGAGRKKKEREASQMTKAEMQALRAELKALLSQRIN
TGVSARYLTSGGIDVDALMAGEGNLEFLGHVDGLGFDDEDVEE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcccatgctgccccgaagaaggcggcgcacaaggcgcacaaacgccagaag
gtcgatgactttcctaaacctctacctaccaagacgaaacgcagagtgcagctcaacgag
ctaggatggaaggctgtttccatgcctgatcgtttggaggacaccgaaggcttctacgga
ctcgaagaaatcgacgatgttgaaattgtaaaggatcctgttaccggcgccttccatttc
gaaactacaaagacagaagacgaagttgcgcgtgatgtcgaggaggcatggcagcgcgag
gaagacgaggctcggcatcttgagaagataactttcggggaaacccaagaggccgagaaa
gatgaggacaaggagtctgaagaagatgagggtaaggaacccaaggtgcagggagaagat
gaggagttggaatgggaaggctttagcgatgaggaaatcgagactgaaacgcccacgctt
gcgacgaacggagagtccgagacaaggaaagagaccaagaaggagaaaaacaagagactt
aaggaagagaaattaaagaagcaggagcagaaaaagacaaatgggcaaatggccaagtca
aatgaacaagataaagcggacaacgacgaagacgatgatgatgacgacgaccaattcgat
gcggaaggtgttgacgacggcgagacatttggccctggcgccttcgatatacttgcaaat
caaccaatggacgatagtgacgaagaagacgtatctgcttggggaaagttggacctgtct
gaggaaatgctcggagcattggcgaagctcaagttttctaaacccaccaacattcaaacg
tcgactatacccgagattatagctggtagagatgtcatcggaaaggcttcaactggttca
ggaaagacgctcgcctttggtattcccattatagagtcatatctcgccggtcgtgcagca
ccaaaagacaccaaagacaaggttccgctcgccctcatcatcgcgccaactcgagaactt
gctcatcagatcaacgaacatctggttaagctctgtgcaaaaggtgactttgactctccg
tacattgcatccatcacgggtggtttgtccgtgcagaagcagcgtaggcaactggaaaag
gcagacatagtcgtgggaaccccaggacggctgtgggaagtcatcagcagtggccaaggc
ttactcgcaaaattcaagcagatcaaattcttggttgtcgatgaagctgatcgcctgtta
agccagggccactttaaggaaatggacgatatcctcaaggtactcgagcctgacgacgaa
gtagatgaaaatgcagagccagcagaaacacccgaagccaaccgccagacactcgtcttc
tcagcaacttttggaaaggatcttcagagaaaacttgccggcaaggctaaatttggtggt
gaccagatgaaccaacaacagtccatggagtatctcttgaagaagcttcgattccgtgaa
gagaagcccaagtttatcgatgccaacccgacttcacaaatggccagtaagcttcaggaa
ggtcttatcgaatgcgctgggcccgaaaaagatctatatctatactcacttctcatgttc
tacaccaagaagcgcgccctcgtcttcacaaactccatctcagccgttcgacgcataaca
ccattcttaaccaacttgaaccttcccgccctcccacttcattccaacatgccacaaaaa
gcccgtctacgctcaatcgaacgcttcaaagaacgaccaggatccatcttagtcgccacc
gacgtcgccgctcgaggtctcgacatccccaaagtcgaactcgtaatccactaccacctc
ccccgcgcagccgacacctacgtgcaccgctccggccgcacagcccgcgccaacgcctca
ggcgctagcatcctcatctgcgcgccggaagaagtagctggcgtccggcgtctaatcgcc
aaagtgcacgctcgcgcggcctcggccccaaagaccaaaaacacatccttcttcatccgc
accctcgacatcgaccgccgcatcgtatcccgtctcaaaccccgcgccacgatctccaag
cgccttgctgacaccgtcatcgccaaggaaaagaaaaacagcggcgacgatgtcctccgc
caggccgctgaggacctcggtgtcgattacgacagcgaggaattcgacaaggaagcgaaa
ggcaagcggggtcgtggtgccggtcgcaagaagaaggagagagaggcgagtcagatgacg
aaagctgagatgcaggcgctgcgtgctgagctgaaggcgttgctgagccagaggattaat
acgggggttagtgcgaggtatcttaccagtggcggcattgacgtcgatgcactcatggcg
ggagagggcaatttggagtttttgggtcacgtggatgggttggggtttgatgatgaggac
gtggaggagtaa
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