Bipolaris sorokiniana: COCSADRAFT_37397
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Entry
COCSADRAFT_37397 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
COCSADRAFT_37397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_37397
Enzymes [BR:
bsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COCSADRAFT_37397
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
COCSADRAFT_37397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
NTP_transf_2
MG3
N_Asn_amidohyd
Motif
Other DBs
NCBI-GeneID:
19138971
NCBI-ProteinID:
XP_007700411
JGI:
Cocsa1_37397
UniProt:
M2S8H8
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MDRQAQTACAESLSQTSGTPIAGLDFSKLPPIAILKTRLNQDEENSLRETLHLYNASLTT
DMSRAKILLGKVGTKGRAAFELRSRNLIAEEFVTPKRRASPAKIGTPNKKQRVFESSYRP
IWASQEDYAAKKGAEETSDTEDEVPIQNSSFSQSPPLHAEDEVPFPTIFDNGSSIDIVWV
VNLNWIESCRTAGHLVPLGDNLMYQGKVQQRPKPSSTKSIKDVFSVMPKEPPASQTLKPT
GPNLSQNVLDRAKLDAQTVTSKTTYKSSQSGNQVSRRFGNKDLAPSQPSSHSYASQTALL
LQQTTSEYEGEDSDIPPPPEWVKQGVKYACQRFTPANGPNEDFLDQLKKIRTNRVLIEDE
IGVRAYSTIIAAIAAYPYKLSHPREIAQLPGCDEKTAVLFVEWKNTGKIKEVEDYENDEA
MKVLRTFYDIWGVGAKTARHFYYDNHWTELDDIIEHGWNDLDRVQQIGAKYYEEFQEPIQ
RAEVEHIVAVVRDHAAKLRDERISVTIVGGYRRGKSVSGDVDIIVSHPELESTAGLVQEI
VESLEDAQWITHTLTMSLANTKRGQHTLPFRSAKGAGVGFDTLDKALVVWQNPAWPTREG
DLERNPRAKNPAIHRRVDIIVAPWRTVGCAVMGWSGGTTFQRDLRRYAKHVKGWKFDSSG
IRSRANGEAIMIEGPDGVEGTPEDAEKAVFKGLGLEYIPPEYRVTY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccaggctcagactgcgtgcgcagagtcgttatctcagacatcaggaacacct
atagcaggccttgactttagtaaacttccgccgatagctatactgaaaacacgcttgaac
caggatgaagaaaattcgctcagagaaactctgcacttatacaatgcgtcgcttactacc
gacatgtcgagggcaaaaatactcctaggtaaggtgggcactaagggaagagctgcgttt
gagttgcgttcgaggaacctaatcgctgaagaatttgtaacgccgaaacgccgtgctagt
cctgcaaaaatagggacacctaacaagaaacaaagagtcttcgagtcgtcgtatagacct
atctgggctagtcaagaggattatgctgcgaagaaaggagccgaagagacgtccgacact
gaagacgaagtgccgatccagaattcgagtttttcacagtctccgccattgcatgctgag
gatgaagtgccctttccaacgatcttcgacaacggttcaagcattgacattgtttgggtt
gtcaacttgaactggatagagtcttgtagaaccgcagggcacctcgttcctctaggcgac
aacttgatgtatcaaggaaaagtgcagcaacgaccaaaaccaagcagcaccaaatccatc
aaggatgtcttttcagtaatgccaaaagagccacctgcatctcagacactcaaacccacg
gggccaaatctgtcacaaaacgtcctggatcgagcaaagttggatgcacaaacagtgaca
agcaagactacatacaagtcttcccaatctggtaatcaagtgtctcggcgcttcggtaac
aaggatttagcgccttcgcagccttcgtcccactcttatgcatcacagacggcgcttctg
cttcagcaaacgacgagcgagtatgaaggcgaagatagtgatataccgccaccgcccgag
tgggtgaagcagggcgtcaagtatgcatgccagcgctttacacccgctaacgggccgaat
gaggatttcctagaccaactcaagaagattaggactaatcgggtccttatcgaagatgag
ataggtgtacgtgcgtactcgaccattattgctgccattgcagcctatccgtacaagctc
agtcacccacgtgagattgcgcaattaccaggatgcgacgaaaagactgcggttcttttc
gttgaatggaagaatactggtaaaatcaaggaagttgaggactacgagaacgatgaggca
atgaaggtcctgcgtacattctatgatatatggggtgttggagcaaagacggcgcgacat
ttttactacgacaaccactggacggaattggacgatatcattgaacatggctggaatgac
cttgaccgagtgcagcagattggcgccaagtactacgaagagtttcaagaaccgattcaa
cgtgctgaagtcgaacacatagtcgctgttgttcgagaccatgcagcaaaactccgggac
gaacgcatcagtgtgaccatagtcggtggctatagacgtggcaaatcagtctctggagat
gtggatataatcgtatcgcaccctgaattggaaagtacagcgggattggtgcaggagatt
gtcgagtcactggaagatgctcagtggatcacgcacaccttgacgatgagcttggcaaat
acgaagcgcggacaacacactttaccttttcgttctgcaaaaggagctggagtagggttt
gacactcttgataaggcactcgtagtatggcagaatcctgcttggccaactcgtgaaggg
gacctcgagcgaaatccacgagcgaagaatccagccatccatcgtcgagtcgacatcatt
gttgcaccttggcggactgtaggctgtgcggtcatgggctggagcggtggcacgacattt
cagcgggatttgcgacggtatgcaaaacatgtgaagggttggaaattcgacagcagcggc
attcgcagtcgagctaatggtgaagctatcatgattgaagggccagacggtgttgaaggg
acgcccgaagatgcagaaaaggcagtgttcaaagggttgggtctagaatatataccgccc
gagtatagagtcacatattga
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