Bipolaris sorokiniana: COCSADRAFT_37985
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Entry
COCSADRAFT_37985 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04138
Autophagy - yeast
bsc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
COCSADRAFT_37985
04148 Efferocytosis
COCSADRAFT_37985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_37985
Membrane trafficking [BR:
bsc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
COCSADRAFT_37985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
TPR_VPS8_2
VPS8_N
zf_RING_Vps8_fungal
Beta-prop_HPS5
zf-RING_Vps41
zf_RING_Vps8
zf-RING_11
PWP3A-B_C
zf-C3H2C3
Beta-prop_EML
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
19139137
NCBI-ProteinID:
XP_007701043
JGI:
Cocsa1_37985
UniProt:
M2T1Q2
LinkDB
All DBs
Position
Unknown
AA seq
1603 aa
AA seq
DB search
MSSDSGESHSSARNHHGQQAGVTGSAGDNLAEYEDSVDESVISRSGAGQEEGGGTDGVRS
ADDGSEKLTFAKTRRNGPRELVQKSASDLSIRSKVLNDDSPASTDIPDDTPSVQGSGISS
PTSSQPLSHSSLRPHRPTSLQPFERRFSSRLSPSPLSSPRGTSPAFLSPHSRQSSISSNV
VIQHLADDASESSQAPWEVVRWTKLRKITAQVFSEVGKRNFGRPTCLNVTVSLAIGTSKG
FILIFDYQQVLKCIIGPGTKAIECGSITALAISADHTTIAGGHATGHIFTWELAKPAKPF
LHIPPLDRESLEDGKSDGHVSGVAILHLGFLGTRHTALVSADDAGMAFSHLATRGLGALG
RTVKTTRILGRYPLSAKSLEKPRKPSSVLAFAPLPLGNVEQPTDDMGLTALLTPYLLVIV
STTPIAQTQHKAPRPKDVVAHSALSGCLTWFPAVKLKTSSGPTNAVSKTKLVYCWSNVLT
VLDVHSDAAASLEKDKPPELRFKPRSRWKAEEAIVAVQWLSRSVLGVLTISQRLMILEDN
TLRVTDSFDLLQKHIYHSDLFSRQLKPVIEQLDENDASMHGVVADAFYMSFKVYKGRMFL
LGFNDCSIGTLSNWADRLLALMEDGDYIAALGLATSYYIGDTDKITVGLPEDDEARHALV
QPKLREMITASLKYSFSQDSDVDDEARERRLKELAEVVFAGLMSMKELDFLFENVYDSYE
EASAEKAFFETLEPYIQDEEIDSIPPNVLKDLITFYASANRSVQLEEMICRLSTDTMDLN
QVTTLCQQYVLYDALIYVWTNAIGDYITPLVNILELIKLVDFDVNETDNIYLTAANKIFP
YLAYTFTGRVYPGGAFMEDDQAYSAKKDMYRFLFSGKNLQWPPGSGQVILTQTDGSPEPP
FPYLQLILDFDASSFMSMLNEAFEDSFLNGEQDMSNSTQVNGTKSGSTLTPTRQSIINYL
FGIMNTDNFDPADIIYFYMFVARNLPKYPQHIMLPGTSLHQVLVGLCSYPAEAMKEDCQL
SVEYLLSIYHPPNPQSLIPLFEKAGFYRVLKSVYRSAQQYDKVLETYLDDEEEEDSVFTC
IAEVLRPNKGLTKKQASEVKAVILNRAADLAAVDASQAAVTVMQYTPDLLEPVLDAIKED
TDAQYHFLEALVEPNRAQAGGPKPINETLPSGFIERYVQLMCTYNSSHVADFVSMLKSGD
LKLEPVLPALEKSGVIDAAVILMARDGIVQGAMDRLVKHLGTLETALTGLINGAAETPDA
ANTEEAIHDLLDDIQKYIKVGVWLCQGQTRITERTPESTIDRRKSAYGEVREADLALDEL
LWLDLVDTSVRLIRDTSSAVGEHDARLSSSNNAPSDTVDTARIVSTLRSSIQQTFSALLT
STTIPPERKPTRRTLSIDAVPARPPLQSKPQSNPSFLRILRCFLSRASTTYSPSLSDLRS
VLSEIFAAYTFEETILSLANRFLDKESFTHVHQITELRKRGWRPRGQVCEACKKRAWGPG
AGPGVWDAWEKREEMRLKSREEAAVGWQGDGGRGKSMGKRPSRVNVMDEAEEGEDGEDKA
VVLFACRHLWHRECLVKDSRGKGGLGEEIARSMGRGLKCGICG
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagattcgggagagagccattccagcgctcgcaaccaccatggccaacaggca
ggcgtcacgggaagcgctggagataatttggctgagtacgaggatagtgtcgatgagagc
gttatttcccgatcaggcgcagggcaagaagagggtggaggcacagacggggtccgatcg
gcagatgacggttctgagaagttgacatttgcgaaaacgaggcggaacggcccacgagaa
ctcgtacaaaagtcggcttcagatttatcaataagatccaaggttctgaatgacgacagt
cccgcatcgacagacattccagacgacactccatcagtccagggctcaggcatatcatca
cccacaagcagtcaacctctatcacacagctcacttcgcccgcatcgcccaacctccttg
cagccctttgagcgtcgcttttcttcgcgtttatcaccctcgccgctttcttcccctcga
ggaacttcgcctgcctttctgtcaccgcattcacggcaatcttctatatctagcaatgtt
gtcatccaacatttggcagacgacgcctcggagtcctctcaggcaccatgggaggttgtc
cgctggacaaagcttcgaaaaatcacagcccaggtcttttcagaggttggcaagcgcaat
tttggccgcccaacatgcctaaacgtcaccgtttccctagccataggtacctcgaaaggc
ttcattctcatcttcgactaccaacaggtgctcaagtgtatcattggaccagggacaaag
gccatagagtgcggctctatcactgccctagcaatatctgcagaccatactactatcgct
ggcggtcatgctactggccatatctttacttgggaattggccaaacccgccaagcctttt
cttcatatcccacccctagatcgagaaagcttggaggacggcaagtcagatggtcacgta
tcgggtgtagcaatcctacacctgggatttttggggacgcgtcatacggcactcgtttcc
gctgatgatgctggcatggccttttcccacctggcaacacgcgggctaggcgcccttggc
cgcacagtaaagacaactcggattctaggaaggtacccgctatcggcaaaatcattagag
aaaccgcgaaaaccgagttctgttctcgcctttgctccactacctctcggaaacgtggag
cagcccaccgacgacatgggcctaacggctctcttgacaccttacctcttagtaatcgta
tcaactacccctattgcgcaaacgcagcacaaggcccctcgtccaaaagacgttgtagca
catagtgcgttgagcggatgtcttacttggtttccagctgtcaagctgaagacttcgagt
gggccgaccaatgcagtgtccaaaactaagcttgtgtactgctggtcaaatgtcctgact
gtactcgatgtccactcagatgcagcggcatctttagaaaaggacaagccacccgagctt
cgtttcaaacctcgaagccgttggaaggcagaagaggcaattgtcgctgttcaatggctc
agcagatcagttctcggcgtactaacaatcagtcagcgcttgatgattctagaagacaac
acactacgtgtgaccgactcttttgatctgctccaaaagcacatttaccactctgatctc
ttctcgcgtcaactcaaacccgttattgagcagttagatgagaacgatgcttcgatgcat
ggcgttgtggctgacgccttctacatgagctttaaagtgtataagggccgcatgtttctg
ctaggcttcaatgactgttctattggcactctttcaaactgggcagatcgtttgttggca
ctcatggaagatggcgattacattgctgcacttggcctcgcaacttcatactatattggt
gatacagacaaaattactgttggattacccgaggatgatgaagcacgccatgctctagtg
cagccgaaattgcgtgagatgattactgcatcactcaaatactccttctcgcaagacagt
gatgtcgacgacgaagcaagagagcggcgactgaaagagctggctgaggtggtattcgcg
gggctaatgagtatgaaagagctcgactttcttttcgaaaatgtgtatgattcttatgaa
gaagcgtcggcggagaaggcttttttcgaaaccctcgagccctatatacaagacgaagag
attgattccataccacccaacgttttgaaggatctcatcaccttctacgcctcagcaaac
cgctcagtccaacttgaagagatgatttgtcggctcagcacggacacaatggatctcaac
caggtcacgacactttgccaacagtatgtcttgtatgatgcgctgatatacgtctggacc
aacgcgattggcgactatattacgcccctcgtcaacattctagagctgatcaagcttgtg
gatttcgacgtgaatgaaacggacaacatctacctcactgcggccaacaaaatctttcca
tacctcgcctacacctttacaggacgggtgtaccctggaggtgcgttcatggaggacgac
caggcttacagtgcaaagaaagatatgtaccggttcttgttctcaggaaagaacctgcaa
tggccccccggctctggtcaggtcatactcacacaaaccgacggtagtcctgaaccacct
tttccttacctgcaactgatccttgactttgatgcttcaagcttcatgagtatgctgaac
gaggcctttgaagatagctttttgaatggtgagcaagacatgtccaacagtacacaagtg
aacggcacgaagagcggctctacccttacgccaactcgccagtccataatcaactacctg
tttggtatcatgaatacggacaattttgatccggcagacattatctatttctacatgttt
gtagccagaaatctgcccaagtatcctcaacacattatgctcccaggaacatctttacac
caggtccttgttggcttatgtagctatcccgcagaagcgatgaaggaagactgccagctc
tctgttgagtatctgctctccatctaccatccaccaaacccacagtctctcatcccgttg
ttcgagaaggctggattctatcgcgtgttgaagtctgtctatcgcagcgcacaacagtat
gacaaagtgctagaaacgtacctggacgatgaagaagaggaggactctgtgtttacgtgt
attgccgaagttctgcggccaaacaaaggccttacaaaaaagcaggccagcgaggtcaaa
gcagtcatcctcaaccgagctgctgacctggctgctgttgacgcatcacaagccgcggta
acagtaatgcaatacactcccgatcttttggaaccagttctagatgccatcaaagaggat
actgatgcccaatatcacttccttgaggctctcgtcgaaccaaaccgagcgcaggcagga
ggccccaagcccatcaatgaaaccctaccatcaggcttcattgaaagatatgtgcaactc
atgtgcacttacaacagttcacatgtggcggactttgtcagcatgttgaaatcgggtgat
ctcaaactggaacccgtacttccagccctggagaaaagtggtgtcattgacgctgcagtc
atactcatggcacgtgatggaattgtccaaggagccatggaccgcttagtgaagcatttg
ggtacgcttgagactgccctgacgggactcatcaatggcgctgcggaaacacctgatgca
gcaaacacagaagaggcaattcacgatctcctcgacgacattcagaagtacatcaaagtt
ggcgtatggttatgccaaggtcagacgcggataacagagcgaacgccagaatctaccatc
gatcgacggaagtcagcctatggtgaagtacgcgaagccgatctcgccttggatgagctg
ttgtggctcgacctcgttgacacctctgtccgtctcattagagacacatccagtgcagtt
ggcgaacacgatgctcgtctttcttcatcaaacaacgctccatccgacacagtcgacaca
gcacgcatcgtctccaccctccgctcttcaatccaacaaaccttctccgccctcttaaca
tccaccactattcccccagaaaggaaaccaacccgccgaacactcagcattgacgcagtc
cctgcccgtcctccactacaatcaaaacctcaatccaacccctccttcctccgcatcctc
cgctgcttcctcagtcgcgcatcgacgacctactccccctccctctcggacctacgctcc
gtcctctccgaaatcttcgcggcctacaccttcgaagaaacaatccttagcctcgccaac
cgcttcctcgataaagaaagcttcacccacgtccaccaaatcactgagctacgcaagcgc
ggatggcggccccgcggccaagtctgcgaggcgtgcaaaaaacgcgcctggggacccgga
gccggaccgggtgtttgggatgcttgggagaagcgcgaggagatgaggttgaagagtaga
gaagaggcagctgtggggtggcaaggggatggggggagagggaagagtatggggaagagg
cctagtcgggttaatgttatggatgaggcggaggagggagaggatggagaggataaagcg
gttgtgttgtttgcttgtaggcatttgtggcatagggagtgtctggtcaaggatagtagg
gggaagggcgggttgggcgaagagattgcgaggagtatggggaggggattgaagtgtggg
atttgtgggtga
DBGET
integrated database retrieval system