Bipolaris sorokiniana: COCSADRAFT_38105
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Entry
COCSADRAFT_38105 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03008
Ribosome biogenesis in eukaryotes
bsc03013
Nucleocytoplasmic transport
bsc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_38105
03015 mRNA surveillance pathway
COCSADRAFT_38105
03008 Ribosome biogenesis in eukaryotes
COCSADRAFT_38105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_38105
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_38105
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCSADRAFT_38105
mRNA cycle factors
Stress granule specific factors
COCSADRAFT_38105
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
COCSADRAFT_38105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAP_C
LRR_NXF1-5
UBA_4
DUF5320
LRR_LRWD1
UBA_8
Motif
Other DBs
NCBI-GeneID:
19139165
NCBI-ProteinID:
XP_007701071
JGI:
Cocsa1_38105
UniProt:
M2S7U5
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MNDQPRGRGRGRGRGRGNWSVSFTPQNNDGDQMMVDGDSSRGRGRGRGRGRGFRGGQNHF
QYDNRSREPPIDVEKIKSNPSYPLMEGFLGRRYDAANKLLNLSAIASDQEILQSGMFATE
GAQKKFFPALMIVCDAILETQEAKEQAIHSVTMSGNNLQNTHAVYQLCNHFRHIQNLDLS
NNAFATLDALKPWKGRFRNVEHLIIDSFPSSNWEDEIISWFPKLKILNGKQVRPGAAPEA
NAQPQQIPQSNTPVPAAAIMDPEQQRKEEMILYVQRETNLTRDYAIQCLEAGQWNLEQAG
ALFAQSRDSLPPEAYN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccaaccccgaggacgaggacgtggccgcggccgtgggcgtgggaactggagt
gtctcttttacaccacagaacaacgacggcgatcagatgatggttgatggcgactcctcg
cgtggacgaggtcgaggcagaggacgtgggagaggttttagaggaggccaaaaccacttt
caatacgacaaccgctcacgagagccgcctatcgatgtcgaaaaaatcaagtcaaaccca
tcctacccacttatggaaggttttctcgggcgccgttacgatgcagccaacaagctactc
aatctctctgccattgccagcgaccaggaaattctccaatccggcatgttcgccacagaa
ggagctcaaaagaagtttttccctgcccttatgattgtttgcgacgccatcctcgagaca
caggaagcgaaagagcaggcgatccacagcgttacaatgtctggcaacaacctccaaaat
acgcacgctgtttaccaactctgtaatcactttcgccacattcagaaccttgacttgagc
aataacgcttttgcgacgctggacgcgctcaagccatggaaaggccgtttcagaaacgtc
gaacacctcatcatcgattcatttccctcgtcaaactgggaagacgagatcatctcgtgg
ttccctaaactcaagatcctgaacggcaaacaagtacgccccggcgcagcgccagaggcc
aacgcacaaccacagcaaataccccaatccaacaccccagtacccgcagctgcaataatg
gatccagagcagcagagaaaagaagaaatgattctctacgttcagcgcgaaactaatctg
acacgcgactacgcaattcagtgcctggaagcgggccaatggaacctcgagcaagcaggt
gctttgttcgctcaaagtcgcgattctctaccaccggaggcttacaactaa
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integrated database retrieval system
