Bipolaris sorokiniana: COCSADRAFT_38419
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Entry
COCSADRAFT_38419 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03430
Mismatch repair
bsc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
COCSADRAFT_38419
03460 Fanconi anemia pathway
COCSADRAFT_38419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_38419
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
COCSADRAFT_38419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Deltaretro_Tax
Motif
Other DBs
NCBI-GeneID:
19139250
NCBI-ProteinID:
XP_007701616
JGI:
Cocsa1_38419
UniProt:
M2T0E2
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MATIKAIESRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNYGLDTIEVQDN
GSGISPQDYQTIALKHYTSKLATYDDLTSLQTFGFRGEALSSLCALSKFYIVTSRASDGP
KGTRLDFEQSGKLKGTSVVAAKQGTTVVVDTLFHNLPVRRKELEKNIKREYNKVLQLLNA
YACISVGVKFSVSNQIPKGKKTVAFATNANASTRDNISNVYGAKTVTALIPLNLEFIMDP
SNRPGATQNIKVPDAHNDIASRTVKIVGHISRPVVGEGRQTPDKQMFFVNSRPCNLPQVS
KAFNEVYKSYNTTQSPFVFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENIKDSLLELF
QGHEQSVPQSQLLKNKTSTSVFKPPTIQPRESTTSVRESDQSDPEGSDDDGAAIQESSRR
ASTRDVPDVANRPGFVKASLLERFAGRDSEDRTTRPRSQSPLFEPEVNTHDVAAGHPQLS
RAIQDFNARVASQSPRSAGLTRPSMSAEPNQQGEGAEQPVPVIKQTPQKPLSQSTIQNAF
DRMRPMRTTVQQATITVGDTTTVSTIGTGSHWVASRRSRIHIPKSSSSAKSLDQTPNKNL
FKKGLGGFTAPGTQLESSDEDEDEDEDEDEGEDDEGEGHINATRIPIRSPSPVKRLPSRA
LEGPRINNMTALSRASPDRSLSMSDGSLDAEPVEVVEKESEAAGEDSDDEYEDDTEKKAR
EEARFTKLIAEAEETAAQPSEMSLKRADKLFTVTQKKHWTINLRRVIKTNIESIAHHAQH
IRSSIDASWARVDQTAMLSTDVQSNGEEAEERLSLTVTKADFGKMRIIGQFNLGFIIAVR
PPTSTSPNSHLFIIDQHASDEKYNFERLSATTKLVSQRLVHPHPLELTAVEEEIILANQP
TLTANGFVVELNPTSDTEPRPGTRASLTSLPMSKEVTFTPSDLEELLSLILDNPPSSSTS
SSSAYILRPSKVRKLLASRACRSSVMIGKTLKTQRMREIVRHMGGMDKPWSCPHGRPTMR
HLLDLEKWVGWREGEGVVGVEVKGEKTDWGEYLRRSRG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatcaaggccatagaaagccgctctgtgcaccagatacagtcgggtcaggtt
attgtcgacctgcagtctgtctgcaaagagctagtggaaaacagcatcgatgcaggcgcc
acggccattgaggtacgcttcaagaattacggcctcgacaccatcgaagtccaagataac
ggctctggcatctcgccccaagactaccaaaccattgccctgaagcactacacctccaag
cttgccacctacgacgacctcacgtcgctgcagactttcggcttccgtggcgaggccttg
tcatcgctatgtgccctctccaaattttacatcgtcacaagcagagcctcagatgggcca
aagggcaccaggctcgacttcgagcagtcgggcaagctcaagggaacgtcggttgtggct
gctaagcagggcaccaccgtcgtggtcgacactctgttccataatctacccgtgaggcga
aaggaactcgagaagaacatcaagcgcgaatacaacaaggtcctacagctgctgaatgca
tatgcatgcatcagtgtcggggttaagttttcggtcagcaaccagatacccaaagggaag
aagacagtagcctttgcaaccaatgcaaatgccagcacgcgggacaacatctccaatgtg
tatggtgcaaagacagtgaccgccctcatacccctcaacctcgagttcatcatggacccc
tccaataggccgggcgccacacaaaatatcaaggtcccggacgcacacaacgacatagca
tcgcggaccgtcaagatagtaggccacatatcccgtcccgtcgtaggcgagggtcgtcag
acgccagacaaacaaatgttctttgtgaattcgcggccctgcaacctgcctcaggtttcc
aaagcattcaatgaggtctacaaatcctacaacaccacacagtctccttttgtctttgcc
gacatcaaacttgatacaaacgcctacgatgtcaatgtaagcccagacaaacgcaccatc
atgctccatgaccaagcagtgctcctggagaacatcaaggactccctactcgagttgttc
cagggacatgaacaaagtgtacctcagtctcagctgctaaaaaataaaacatcgacatct
gtctttaaacctcccacgatccaacctcgtgaaagcactacatctgtacgagaaagcgac
cagagcgatccagaaggctcagatgatgacggggcggcgatacaagagagctctagaaga
gcttcgacacgagacgtgcctgatgtggctaaccgtcccggatttgtgaaagcgagcctt
ctcgaacgattcgctggccgcgactctgaagaccggacgactcgtccacgatcacaatct
ccattatttgaacccgaggtaaatacacatgatgttgctgctgggcacccgcagctttcc
agggccattcaagattttaatgcacgtgtggcgtctcagagccctcgctcggcgggacta
acacgcccatcaatgtctgctgaacctaatcaacaaggtgaaggtgcagaacagccagtc
ccggttataaagcaaactccccagaagccgttatcacaaagcaccattcagaatgctttt
gatcgtatgcgccccatgcgaacaacggttcagcaggccacaataacagttggcgatact
acaactgtctctacaattggtactggtagtcattgggtagcttcaaggcgatcgaggata
cacatcccaaagtcttcttcttctgccaagtcattagatcagacaccaaataaaaacctg
ttcaagaagggcttgggcgggttcacagcaccgggcacgcaattggagagcagtgatgaa
gacgaggatgaagacgaagacgaggatgaaggcgaagacgacgagggtgaaggtcatatc
aacgcgactcgtataccaatacgctctccctctcctgtgaaacgcttgccatccagggca
ctcgaggggccacgtatcaacaacatgactgccttgtcccgcgcttctccagatcgctca
ttgtccatgtctgacggatccttggacgctgagcctgttgaggttgttgaaaaagaatca
gaggcagctggtgaagattcggacgatgagtacgaggacgataccgagaagaaggccaga
gaggaagccaggtttactaaactgattgcggaggctgaagagactgcggctcagcccagt
gagatgagcctaaagcgtgccgacaagctctttacggttacccaaaagaagcactggact
atcaacctcagacgcgtcatcaagaccaatattgagtcgattgcccatcatgcgcagcac
attcgatcctctatcgatgcatcttgggcacgagttgatcaaacggcaatgctgtctacc
gatgtccagtcaaatggagaagaggcagaagaacgtctcagtctaacagtaacaaaagct
gatttcggaaaaatgcgcatcatcggccaattcaaccttggcttcatcatagccgtacga
cccccaacctcaacatcaccaaactcgcacctcttcatcatcgaccagcacgccagtgac
gaaaaatacaactttgaacgcctatccgcaaccaccaaactcgtctcccagcgcctagtg
cacccccaccccctcgaactaaccgccgtagaagaagaaataatcctcgcaaaccaaccc
actctaaccgccaacggcttcgtcgtcgagctcaaccctacatctgacactgaaccccgg
cccggtacccgcgcaagcctcacctcccttcccatgtccaaagaggtaaccttcaccccc
tcagaccttgaagaactcctctctctcatcctcgacaaccctccttcctcttccacttcc
tcatcttcagcatacatcttgcgcccctccaaagtccgcaagttactcgctagccgtgcg
tgcaggagctcagttatgattggtaagacgctcaagacgcagcgtatgcgcgagattgtg
aggcatatggggggtatggataagccgtggtcgtgcccgcatggaaggccgacgatgagg
catttgttggatttggagaagtgggtcgggtggagggagggggaaggagttgtgggggtt
gaggttaagggggagaagacggattggggggagtatttgaggaggagtagggggtga
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integrated database retrieval system
