Bipolaris sorokiniana: COCSADRAFT_39072
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Entry
COCSADRAFT_39072 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 3 protein
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc00040
Pentose and glucuronate interconversions
bsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
COCSADRAFT_39072
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
COCSADRAFT_39072
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
19139412
NCBI-ProteinID:
XP_007702564
JGI:
Cocsa1_39072
UniProt:
M2SWI1
LinkDB
All DBs
Position
Unknown
AA seq
256 aa
AA seq
DB search
MKTSIAASILGFALAASAGPARIFPRNFYTMMKRGSLPVPQGNGTETFSEPKEITGVFDG
GLKTYGRGVSCTGQAEGGNSDAVFLLKDGATLKNAIIGKDQIEGVHCEGSCTIENVWWVS
VCEDALTLKGDGDATVIGGGATAAQDKVIQHNGKGTVTIENFTVDNFGKLYRACGNCKES
AERHVVIKGVKASNGKLLAGINSNFGDSATIDAATCATGVKEICEEFKGTTPGNEPDSVS
TGPSSACKFSGSVAAC
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttccatcgctgcctccatcctgggcttcgccctcgccgcctcagccggcccg
gctcgcatcttcccccgaaacttttacacaatgatgaaacgaggctcgctgcctgtgccg
cagggcaacggcactgagaccttctccgaacccaaggaaatcaccggtgtctttgacgga
ggcctcaagacatacggccgcggcgtctcttgcactggccaagccgagggcggcaactcc
gacgccgtgttcctgctcaaggacggtgctacgctcaagaacgccattattggcaaggac
cagatcgagggtgtgcactgcgagggttcttgcacgattgagaatgtgtggtgggtgtct
gtatgtgaagatgctctcacactcaagggcgatggcgatgctaccgttatcggaggcggc
gccacagccgcacaagacaaagtgatccagcacaacggcaaaggcaccgtcacaatcgaa
aacttcactgtcgacaacttcggcaaactctaccgcgcctgcggcaactgcaaggagagc
gccgagcgccatgtcgttatcaagggcgtcaaagcgtcaaatggaaagttgcttgcgggt
atcaactcaaactttggtgactcggctacgattgatgcggctacttgtgctacgggtgtc
aaggagatttgcgaagagttcaagggaacgacgcctggtaacgagccggattctgtgtca
acgggcccgtcgagtgcttgcaagttctctgggtcggttgctgcgtgctag
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