Bipolaris sorokiniana: COCSADRAFT_39309 Help Entry COCSADRAFT_39309  CDS       T03124                                  Name (RefSeq) hypothetical protein   KO K20179   vacuolar protein sorting-associated protein 11 Organism bsc  Bipolaris sorokiniana Pathway bsc04138   Autophagy - yeast bsc04148   Efferocytosis Brite KEGG Orthology (KO) [BR:bsc00001]  09140 Cellular Processes   09141 Transport and catabolism    04138 Autophagy - yeast     COCSADRAFT_39309    04148 Efferocytosis     COCSADRAFT_39309  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bsc04131]     COCSADRAFT_39309 Membrane trafficking [BR:bsc04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     COCSADRAFT_39309    Hops complex     COCSADRAFT_39309 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PEP5_VPS11_N VPS11_N TPR_PEP5_VPS11 VPS11_C Clathrin zf-C3HC4_2 TPR_Vps41 zf-C3H2C3 zf-RING_5 zf-RING_UBOX zf-C3HC4 zf_RING_Vps8_fungal zf-RING_2 TPR_11 Beta-prop_HPS5 zf-RING_Vps41 TPR_Vps8 zf-ANAPC11 zf_RING_Vps8 zf-rbx1 Zn_ribbon_PaaD Motif Other DBs NCBI-GeneID:  19139469 NCBI-ProteinID:  XP_007702621 JGI:  Cocsa1_39309 UniProt:  M2SGU1 LinkDB All DBs Position Unknown AA seq 974 aa AA seqDB search MAVTPWQFRFFDVSQVKLPDDEGAFLSEIGDITCIVSGSESIFFGGTDGVVRIVSEAFKV VRTFKAYDTGSITHMKQIEGTSLLVTIAEDLSDEPVLKVWALDKLEKKTGIPRCQSTLTI HNGRKQFPISAFAALDDLSQLAVGFANGAVTVVRGDLIHDRGARQRTVFESEEPITGIEF REGNITTLYIATTGRIMTLIISGRGQGQPAKSLDEYGCGVGCMAVDKSSRDVVVARNDAI YYYGQHGRGPPYTYEGEKKMISVFKDYIVIVAPPKTNAMPRSNPLRAFGVGAADDVFNTS SFTLLNTELRFIAHQEQLTSQVKAVVAEWGDLFVFTIDGKIFRYHEKPFAQKLDILYQRN LYVLAINLAQKAGLDSSQQNIILRKFGDYLYSKQDYDTAMQQYLKAIDNTEPSQIIRKFL DTQRIHNLIEYLEELHDHHKATSDHTTLLLNCYAKLKDVEKLENFIKSPDDLKFDLDTAI SMCRQGGYYDQAAFLARKHGEHELVVDVLIEDSKRYAEALAYIWRLEPEVTYFNLMKYAT VLLQHLPKDTTQLFIDYYTGKFRPKQDAIVIPNAPSSGGGMSMGLGVASSAVQNLAALLP LPYMNTNALASPPNGEQKGTMSQAQIVETTTDEPAPEYKVPKPRTAFSAFVDHPQEFIVF LEACIASEDLREDDKVDLYTTLFEMYLHTASSKKDGERQEWENKAKKLVEGKNIPIDTSN VLLLSHLSNFRDGAILVREQQGLYFDIFRSCTASNDTQGAIRALRKYGPEEPALYPAALA YFTSSPAILTEAGDELDSVLKKIDEDGLMAPLQVIQTLSTNGVATMGMIKAYLSTTIERE RAEIAANRRNIETFRSDTSAKKAELEALNTKPAVFQNSRCQVCMKSLELPVVHFLCKHSY HQSCLSTDEDVHDAEVECPICSSNNATIKAIRRAQVESAERHDLFQDALKRGRDGFAVIS EWFGRGVMGVGSSE NT seq 2925 nt NT seq  +upstreamnt  +downstreamnt atggcagtcactccgtggcagttccggttcttcgacgtctcgcaagtcaagctccccgat gacgagggcgctttcctgtccgagattggagacattacatgcatagtatccggatctgag agcatcttctttggtggtacagatggcgtcgttcgcatcgtgtccgaggccttcaaggtc gtgcgcaccttcaaggcctatgacaccggctcaatcacccacatgaagcagatcgagggc acctctctcctagtaaccatagccgaagacctttctgatgagccagttctgaaagtttgg gccctggacaagctcgagaagaagacgggcattccacgatgccagagcaccctcaccata cacaatgggcgcaagcagtttcccatatccgctttcgcggcgctcgatgatctatctcaa ttggcagttgggtttgcaaatggcgctgtcactgtcgtacgcggcgacctcatccacgac cgcggcgcgcgacaacggactgtgttcgaatccgaagagcccattactggtatagagttt agggaaggcaatatcacaaccttgtacattgcaactaccggtcgcatcatgacactcata atatctggaaggggccaggggcagcctgcgaaatctctcgacgagtatggctgtggtgtg ggttgtatggccgtggacaaatcgtctcgagatgtggtagtcgcacgcaatgatgctatt tactactatggccaacacggacgtgggccgccttacacatacgaaggcgagaaaaagatg atttctgtgttcaaggactatatcgttatcgttgcgcctccaaagacaaatgcgatgccc cggtccaaccctctccgagcctttggcgttggcgctgccgatgatgtcttcaacacgtct agcttcacgcttctcaatacagagctgaggttcatcgcccaccaggaacagctgacctcg caggtaaaggctgttgtcgcagaatggggagacctttttgtcttcacaattgatggaaag atctttagatatcacgagaaaccttttgctcagaaacttgacatactctaccaacgcaac ttatatgttctggccatcaacctggctcagaaagcaggactggactcttcccagcagaac attatccttcgcaagtttggcgactacttgtactcgaagcaagactatgacactgctatg cagcagtatctcaaggccattgataatactgagccatctcagatcatccgaaagtttctt gacacacagagaatacacaacctgatagagtatctggaagagctccacgaccaccacaag gcgacatccgaccacactactctactcttgaattgctatgccaagcttaaggatgtagag aaacttgaaaacttcatcaagtcacccgacgatctaaagtttgatcttgatacggccatc tcgatgtgtcgacagggaggttattacgatcaggcagctttcctcgcgcgaaagcacggg gagcatgaactcgttgtcgacgttctgatcgaggattcgaagcggtatgcggaagctcta gcctacatatggcggctggaacccgaagtgacatacttcaatctcatgaagtatgctaca gtacttttgcagcacttgcccaaggacaccacacagctgttcatcgattactacactgga aaattccggcctaagcaggatgctattgtcatacctaatgcgccttcatctgggggaggc atgagcatgggtctaggtgttgcatccagtgctgtacagaacctcgctgcattactccca ttgccttatatgaataccaatgcgttagcatcaccgcctaacggcgaacaaaagggcacc atgagccaagctcaaatagtcgaaacgacgaccgacgagcccgcgcctgaatataaagtc ccgaaaccacggactgcattctcagcatttgtcgaccaccctcaagaattcatagtgttc ctcgaagcatgcattgcttcggaagatcttcgcgaagacgacaaggtcgatctttacacg actttgtttgaaatgtatctacatactgcgtcgtcgaagaaagacggcgagcggcaagag tgggagaacaaggccaagaagctcgtcgaaggcaagaacatacccatagacacatcaaat gtgttgctgctttcccacctctccaacttccgcgacggcgcgatcctcgttcgcgagcag caaggcctctactttgatattttccgctcatgcactgcctccaacgacacccaaggcgcc attcgcgccctacgaaagtacggcccagaagaacccgcactctacccagccgcattggcc tacttcacctcctcgcccgccatcctcaccgaagcaggtgacgaactcgactcggtcctc aaaaagatcgacgaagatggtctcatggcgcccctccaagtcattcagacgctttctacc aacggcgtcgcaacaatgggcatgataaaagcctacctcagcacaacaatcgaacgcgag cgcgccgaaatcgcagccaaccgccgcaacatcgagaccttccgctccgacacgtccgcc aaaaaagcagaactagaggctctcaacaccaaacctgctgtcttccagaattcgcgctgc caggtctgcatgaagagcttggagttacctgttgtgcacttcttgtgcaaacatagctac caccagagttgtctgagcacagatgaggatgtgcatgatgcagaggttgaatgtccgatt tgcagttcgaataatgccaccatcaaagcgattaggcgtgcgcaggtcgagagtgcggaa cggcatgatttgtttcaggatgcgcttaagaggggcagggatgggtttgcggttattagt gagtggtttggtagaggtgtcatgggggtggggagttcagagtaa

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