Bipolaris sorokiniana: COCSADRAFT_39548
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Entry
COCSADRAFT_39548 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_39548
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
COCSADRAFT_39548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
19139517
NCBI-ProteinID:
XP_007703057
JGI:
Cocsa1_39548
UniProt:
M2SVG9
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MSAPQIARPGRAPRLSSLNKPDSYQYQSSATKRRAAGPPQPVKPTQRTYTCCEAPLINSA
DGTVMCYNCGKVHDESQIVSEVTFGETSGGAAIVEGGFIHANQRHANSMGGTMRGLGGME
SREQAAMNGKNAIQALGASLNQREAVIEQAFSWYKLAMNHRFIQGRRMRNVAAVSIYMAA
RRQPENTLMLIDLAEKIQTNVWALGDTYKQFLEMLKEEDPAQLAGSKAVQEIEPLMLKYC
RKLEFGDDSHRVADDACKVLKRMNRDWMVQGRQPAGLCGACIIIAARMNNFRRTIREVVY
VVKVADSTITSRLYEYKRTQSAALTVNQFREFAPRLKVKAQPPAIWRRAEKEERQAKRRR
RLQGYDDTAASLENKPGSGEVETGMATAPTRTSKRRKSNDGSSHPVSTQSGDISTRGSGV
PAEVEAFDGNADAMIDSVATALEEVEAGEATDPDFVMPKKRGRPPKKRVPIVVPEEDLEI
EQDIEEELTNAIKDWEGIFKEFANNEDHDLLRRSGWTAAEMARAAQDKRDIPINTDPEIG
EEEFEDDPDVATCILGPEEVRRKEAIWITENEEWLRAQQEKMLLAELEAAEDKPKKPKQK
RKHHQMGDGSVLEGQPATSAADAAHKMLKKRANKAFSNHINYDRLKELFPGGGTNASASP
ADSAQGTSPVNRSPPASALQHPVTDEDAEGEEEGEEEEEEEEMLGEEEEEEDLEYNYRDD
DDEGFGNESYDY
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgccccagatcgcgaggccgggcagggccccgcgcctgtcgagcctgaacaaa
cccgattcctaccagtaccagtcctccgcaacaaaacgaagagccgccggcccgccccag
cccgtaaaacccacccagcgcacctacacctgctgcgaggcacccttaatcaattccgcc
gacggcaccgtcatgtgctacaactgcggaaaagtccacgacgagagccaaattgtttcc
gaagtcacttttggcgaaacttcgggcggagcagccatcgtcgagggtggcttcatccat
gccaaccagcgacatgccaattccatgggcggcaccatgcggggtctcggtggcatggag
agtagggagcaggctgctatgaacggaaagaacgccattcaagctctgggtgcttctctc
aaccagcgcgaggcagtcatagaacaggcttttagttggtacaaactcgccatgaaccac
aggttcatccagggtcggcgcatgagaaacgtcgccgctgtctccatctacatggcagcc
cgtaggcagcccgagaacactctcatgcttatcgacttggctgagaagattcaaacaaac
gtctgggctttgggtgatacatacaagcagtttttggaaatgctcaaagaggaggatcct
gcccagctcgctggtagcaaggctgtacaggagattgagcccttgatgttgaagtattgc
cggaaacttgagtttggagacgattctcatagagtagctgatgatgcctgcaaggtcttg
aagcgcatgaatcgcgactggatggtgcaaggccgccagcccgctggattgtgtggtgct
tgtattatcattgctgctcgtatgaacaactttcgtcgtaccatccgtgaggttgtctat
gttgtcaaggtcgccgattccaccattacttcccgtctatacgaatacaagaggacacag
agtgcagccttgactgtcaaccaattccgagagtttgcgccaagactgaaagtcaaggct
cagccgccagccatctggaggcgtgcagaaaaggaggagcgacaggcgaagagaaggaga
cggcttcaaggatacgatgatactgctgcatctttagagaacaagccaggaagcggtgaa
gtagagactggcatggctacagcgccaacgcggacaagcaagagacgaaagtctaatgat
ggttcatcacacccagtttctactcaaagcggagacataagcactcgaggaagcggcgta
cctgcagaagtcgaggcttttgatggcaatgccgacgcaatgatcgatagtgtcgccact
gcgctcgaggaagtcgaagcaggcgaggctactgatccagactttgtcatgccgaagaaa
cgcggtcgtccccctaagaagcgagtccccatcgtcgttcctgaagaagatctcgaaatc
gagcaagacattgaggaagaactcacgaatgccatcaaggactgggagggtattttcaag
gaattcgccaacaacgaagaccacgatctcctccgacgctccggttggacggctgccgaa
atggcacgcgcggcccaagacaaacgcgacatccccataaacacggaccctgaaatcggc
gaagaagaattcgaagacgacccagacgtcgccacatgcatcctaggccccgaagaagtc
cgccgcaaagaagccatctggatcacggaaaacgaagaatggctccgcgcccagcaagaa
aagatgctcctcgccgaactcgaggccgcagaagacaagcctaagaagcccaaacagaaa
cgcaaacaccaccagatgggtgacggcagcgtcctcgagggtcaacctgctactagtgct
gcagacgccgcgcacaagatgctcaagaaacgagcgaataaggcgtttagcaatcacatc
aattacgataggctcaaggaactttttccaggcggtggaacaaatgcttcggctagtccc
gcggatagcgcccaaggtactagtccggtgaataggtctccgcctgcttctgctctccag
cacccagttacggatgaggatgcggagggtgaagaagaaggggaggaggaggaagaggaa
gaggagatgctaggggaagaagaggaggaagaagatctcgagtacaactatcgggatgat
gatgatgaggggtttgggaatgagagttatgactactag
DBGET
integrated database retrieval system
