Bipolaris sorokiniana: COCSADRAFT_40675
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Entry
COCSADRAFT_40675 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_40675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_40675
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_40675
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
COCSADRAFT_40675
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
COCSADRAFT_40675
RSF complex
COCSADRAFT_40675
WICH complex
COCSADRAFT_40675
B-WICH complex
COCSADRAFT_40675
NORC complex
COCSADRAFT_40675
BRF complex
COCSADRAFT_40675
NuRF complex (fruit fly)
COCSADRAFT_40675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
19139804
NCBI-ProteinID:
XP_007704149
JGI:
Cocsa1_40675
UniProt:
M2STZ7
LinkDB
All DBs
Position
Unknown
AA seq
1127 aa
AA seq
DB search
MPRKSAAKADEPSSEDVSAHSDVDMQDQQEDKMSGFKKFGYNLDTPDYTDSDTNTRGNSV
AGDSAPPDGRKRRAEEMNMRKSMYGKKAEGLRASMEDDTIRRFRYLLGLTDLFRHFIDTN
PNPRIKEILAEIDRQDTEESSKSKANKIRKGGAAAERRRKTEQEEDAELVREEKHGGHNE
TVFRESPGYIQGGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFVGYLRYI
AGITGPHLVAVPKSTLDNWKREFAKWCPEINILVLQGSKDDRAELIKDRLVPDGFDVCIT
SYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQMVRMFNSRSRLLITGTPLQNNLH
ELWALLNFLLPDVFGDSAAFDDWFSQQNEDSDAVVQQLHKVLRPFLLRRVKADVEKSLLP
KKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGNKESKTRLLNIVMQLRKCCNHPYLFE
GAEPGPPYTTDEHLVTNSAKMVMLDKLLKRMKAQGSRVLIFSQMSRVLDIMEDYSVMRDY
KYCRIDGSTAHEDRIQAIDDYNKEGSDKFLFLLTTRAGGLGINLTSADIVVLFDSDWNPQ
ADLQAMDRAHRIGQTKQVYVFRFVTEMAIEEKVLERAAQKLRLDQLVIQQGRTQQPVKNA
ASKDELLTMIQHGAEAVFQSKGPVGSAASGELGDDEFDAVMRRGEEMTEKLNKRYEALGL
DDLQKFTSDSTYEWNGETFQPRKKEIGISWINPSKRERKEQNYGIDSYYRKALVTGGRTE
NKQPRIPRAPKQIVIHDYQFFPDRLAELQDKETAWYRKENNLKAPLPEGSDEDLEVREAD
QQLAQQEIDNAEPLTEEEKAEKERLIEKGFPEWNKRDFQQFLNGSAKYGRQNYEGISEEV
DGKTAEEIEAYAKVFWKKYKTLDNWQKHLGVIEEGEQRVRQSEEKKRLIAKKVGMYRMPL
QQMQIKYTVSTTNKKVYTEDEDKFLVVMLHKHGVEGDFIYEKIRDEIRESPLFRFDWFFL
SRTPQEIGRRCTTLISAIVRELGDGDAKNKNGKRGYEEEETEEEEEEQPKKKTKNGVKNK
QLDTVKSKASPASATPSRASSVATNGSATKGSATKGKGKGKGKGKKK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaagagcgctgcaaaggccgacgagccatcttctgaagacgtgtcggcgcat
tccgacgtcgacatgcaagaccagcaggaagacaagatgagcggcttcaagaagttcgga
tacaatctagataccccagactacacagactccgacacaaacacaaggggaaacagtgtc
gcaggcgacagcgcgccccctgatggcagaaagcgacgcgccgaagagatgaacatgcgc
aaatccatgtacggaaagaaagctgagggcctgagggcatcaatggaagacgacaccatt
cgccgctttcgatatctccttggtctcaccgacctgttccgccacttcatcgacacaaat
cccaacccgcgtatcaaggagattctcgccgagatcgaccggcaggacaccgaagagagc
agcaagtcaaaggccaacaagattcgcaaaggcggcgctgctgccgagcgtcgacgcaag
actgagcaggaagaagacgccgagttagtgcgcgaggaaaagcatggtggccacaacgag
acagttttccgcgagtcgccaggctacattcagggcggtacaatgcgcgactaccagatc
gctggtctcaactggctgatttcgttgcacgaaaatggtatttcaggtatcctggctgac
gagatgggtttgggaaagacactacagaccatttccttcgtcggctacctccgctatatc
gccggcatcactggaccccacctggtcgcagtgcccaaatcaaccctggacaactggaag
cgcgagtttgccaaatggtgccccgaaatcaacatcttggtgctacagggtagcaaggat
gatcgtgccgaactcattaaagaccgccttgtccctgatggctttgacgtgtgtatcaca
tcctacgaaatgatcttgcgcgagaagtcgcacttgaaaaagtttgcgtgggagtacatc
atcatcgatgaggcacatcgtatcaagaatgaggagtcgtcactggcacagatggttcgc
atgttcaactcgcgaagccggctgcttattaccggtacccctcttcagaacaacctccac
gaactttgggctttgctcaatttccttctcccagatgtatttggtgactcagctgccttt
gacgactggttttcacagcagaatgaggactccgatgcagtcgtccaacagctacacaag
gttcttcgaccctttttgctccgccgtgtcaaggccgatgtcgaaaagtcactgctgcct
aagaaggaaattaatctctacgtgggcatgtcggacatgcaggtccagtggtacaagaag
attcttgaaaaggacattgatgcagtcaatggtggtgctggaaacaaggagtctaagacc
cgccttctcaacattgtcatgcagctgcgaaagtgctgcaaccacccttacctcttcgaa
ggcgccgagcccggtccaccatacactaccgacgagcatctggtgaccaactcagccaag
atggtaatgcttgacaaactgctcaagcgtatgaaggctcaaggcagccgtgtactcatc
ttctcccagatgagtcgtgtgttggatatcatggaagattactccgtcatgcgcgattac
aagtactgccgtatcgatggttcgaccgcacacgaggaccgtatccaagcgattgacgac
tacaacaaggaaggctctgacaagttcctgttcctcctgacaacgcgcgctggtggcttg
ggtatcaacttgacttctgccgacatcgtcgttctctttgatagcgactggaacccacag
gccgatcttcaagccatggaccgcgctcaccgtatcggccagaccaagcaggtatatgtg
ttccgattcgttactgagatggccattgaagaaaaggtgctcgagcgcgcggcacaaaaa
ctacgtctggaccaactagtcattcagcagggtcgcacccaacagcctgtgaagaatgca
gcatccaaagacgagctcttgaccatgatccagcacggcgcggaggcagtgttccagagc
aagggccctgttggatcagctgccagcggcgaactcggagatgacgaattcgatgccgtc
atgcgccgtggtgaggagatgactgagaagctgaacaaaaggtacgaggcccttggtctt
gatgaccttcaaaagttcacatccgactcaacctacgaatggaatggcgagacattccag
cctcgcaagaaggaaattggaatctcctggatcaacccatcaaagcgtgagcgcaaggaa
cagaactacggtattgattcgtactaccgaaaagctcttgtcactggcggccgaacagag
aataagcaacccaggatacctcgcgcaccaaagcagattgtcattcacgactaccagttc
ttcccagaccgccttgcggaactccaagacaaggaaacagcatggtatcggaaggagaac
aatctcaaggcaccccttccggagggttccgacgaggacctcgaggttcgcgaggctgac
caacagcttgcacaacaagagattgacaacgccgagccattgaccgaagaggaaaaggcg
gagaaagagcgactgattgaaaagggtttccccgagtggaataagcgtgacttccagcag
tttctcaacggcagtgccaagtatggccgtcagaattacgagggtatctcagaagaagtc
gacggcaagactgccgaggaaattgaagcatacgccaaggtattctggaaaaagtacaaa
acgctagacaactggcaaaagcacttgggtgtgattgaggagggcgagcaacgcgtacga
caatcagaagagaagaagcggttgatcgcaaagaaggttggcatgtaccgcatgcccctc
cagcagatgcagatcaagtacacagtatcgacgacgaacaagaaggtgtacacggaagac
gaagacaagttccttgtagtcatgctgcacaagcatggtgttgagggcgactttatctac
gagaagatccgcgacgagatccgggagtcgccattgttccgcttcgactggtttttcctg
agtcgcacgccacaggagattggtcgtcgttgtactacgctgatctcagccattgtgcgc
gagctcggtgacggggatgccaagaacaagaatggcaagcggggatacgaggaggaggag
acagaggaagaggaggaagagcaaccaaagaagaagaccaagaacggcgtcaagaataag
caactggatactgtaaagagcaaggcttctcccgcctcggcaacgccgtctcgagcaagc
agtgtagcaacgaatggatcggcaaccaagggatcagcaaccaaaggaaagggcaagggc
aagggcaagggcaagaagaaataa
DBGET
integrated database retrieval system
