Bipolaris sorokiniana: COCSADRAFT_40695
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Entry
COCSADRAFT_40695 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCSADRAFT_40695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_40695
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
COCSADRAFT_40695
SWR1 complex
COCSADRAFT_40695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
DEAD_2
Motif
Other DBs
NCBI-GeneID:
19139808
NCBI-ProteinID:
XP_007704461
JGI:
Cocsa1_40695
UniProt:
M2QWM9
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MEEVTAADRDYDSIPPRDSIDAPSPSAIAPHGHGTDDDDNAPLTANDGEQLASVNGHDGG
VIGRPAKRRKLEDTTTTPRRSTSRAASPPWKSFVADGPTTVFENGVRKSSRVNRETAPPT
PEPTKPISRPAAKATQTNGTPKSAARRESRNGSGPTSVPKGKAASALARKASTQSLTTPA
RKSERNTKTSALAKQTPVMSPQLQNGSPSGGIRKRGTRQRRGTQIPTDPSGDEFMDTPDT
NGHDPDAGLYASPDGSNPSIPAPRLRLRLRKPDPPNRHPHHAPPKSQFASLEEWLQQDDP
LEGEESLRITQEKAQDEAQRRLRIVEAAEHGVLSQERCSVYAPEPAPEPPAQYGHWDHVV
AHALHFNKLLKEEKAFHRRTAKILAREAYEFWKNKFKRKSQDEIEQEETERQVVRYKQVV
KDVKDAWGLVRVEIDKERVTKYEEEQLQLGHKAMDDMFNQAQEILGGRTAGDGASSLMSE
DRNLDDMEDFESAASNTSEQQLDDDVMSSSSDSEPENEHDDDANLTAEQLREKYGQLPDL
PVTSSEDEDDSGDEEEEEGTPAPTPDPDIETEDFDEPPETLANGFHHHEDNEDEKKPGYI
DPATVELDQVDDALMDSENDDKSSESGSEAWSSNEGSGTEDEDGNDADDSEADDDDSGEE
DVGLMGFLAPKDVKKLKEAAKTAIEDNELESEEQMTEQVNGDAATSMKDEEGKLHANGRS
AVAMNDEPCVNGNAAPSEPAPSIEAAEPQTSVEPIEATPMEDVVQSKSVPRSRHASSPPR
TEVPFLLRGTLREYQHDGLDWLANLYESDTNGILADEMGLGKTIQTISLLAYLAVRHEIW
GPHLVVVPTSVMLNWEMEFRKFLPGFKILTYYGDINERKRKRLGWRNTGKDMYNVVITSY
QLILQDAAAFKMRPWRYLVLDEAHNIKNFKSQRWQTMLNLRTERRLLLTGTPLQNNIDEL
WSLLYFLMPAGFAGEGRIAGLEEFTLALKNPTSQILDQGRQQLDAEAQKVVKRLHEVLRP
YLLRRLKSEVEKQMPGKYEHVVYCKLSKRQRQLYDGFMGRASTKEILSSGNYMSIINCLM
SLRKVCNHPDLFETRAIVTSMAMPKSVAAQYEIKDLLIRKRLQEGMEDKRVSLDALNLNF
ARREQTQLGHARRTYPIRATRPLEDLIERQTRRINKPVEAGTSPLQSAMAAMAKREQVAV
RDHLQTCVALTRARTQFMPIYGKDIIDAVTVDWHEYTFGAITEGKKVPRPRLYRPHHAPH
PTYHGFGQAHLQPRPEDVVQYDVVQRHHGRLGFRSPRSQRVISQWHDQQITHFFDMIPTL
EQRAEAFEPLITRFTCVTPAVAAEELAPLTLSKRGVDLIQASDAAHQPDPFHSSRIRQSI
AFPDKRLLQYDCGKLQRLATLLRDLQAGGHRALIFTQMTKVLDILEQFLNIHGHRYLRLD
GSTKIEQRQILTDRFNNDPRILCFILSSRSGGLGINLTGADTVIFYDLDWNPAMDKQCQD
RAHRIGQTRDVHIYKFVSEYTIEANILRKSNQKRLLDDVIIQKGDFTTDTFNKVTWRDAL
DEDMGIDTTDEAGAAMERVLGEKIGLLGDARVMGNVEDTEDRTAASIAQKEIVDEIQEDK
VDFNESVNATRAASEAAAASTSKDEEELDIHGNEKLKRHVDEYMLSLYREEFGKEPYRPP
TDRQKRNRKGQDPHVRQRKKKY
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagttactgccgcggatcgcgactacgactccatcccaccacgcgactcgatc
gacgcacccagcccatccgccatcgcgccccatggacacggcaccgacgacgacgacaat
gcgcccctgactgccaatgacggagagcagcttgcctctgtaaatggccatgatggtggc
gtcattgggcggcctgcaaaacggcgaaaattagaagacacgaccacgacgccacgtcgc
tcgacatcacgcgctgcctcgcccccgtggaagtcatttgtagcagatggccctacaacc
gtctttgaaaatggcgtaaggaagtcatcgcgtgtgaacagagaaactgcgccgcctaca
cccgagcccacaaagcccatctcccgcccagcggccaaagcaacgcagaccaacggcact
cctaagagtgcggccaggcgcgagtcgcgcaatggctcagggccgacgtcggtcccgaaa
gggaaggcggcatctgccctcgctaggaaggcgtccacacagtctttgactacgccggcc
cgcaagtctgagcggaatacaaagacgtctgctctcgccaaacagacaccagtcatgtcg
ccgcaattacaaaacgggtcgcctagcggcggaattcgcaagcgaggcactcgccagcga
aggggcacgcaaataccgactgacccatcaggtgatgagttcatggatactcctgacacc
aatggtcacgaccccgacgccggcctatacgcgtcgcccgatggctccaatccgtcaata
ccggccccgcgattgcgactacgactccgaaagcccgaccccccgaaccgccatccccat
cacgccccgcccaagtcgcagttcgcttcactcgaagaatggttacaacaagatgacccg
ttggaaggcgaggagtcgctgcgcataacacaggaaaaggcccaggacgaggcacaacgc
cggctgcgtattgttgaagcggccgagcacggagtactgagccaagaacgatgcagtgtc
tacgctcctgagcctgcaccagaaccgccagctcagtacggccattgggaccatgtggtt
gcgcatgctttgcactttaacaagctgctcaaagaagaaaaggcgtttcatcgccggacg
gcaaagattctggctagagaagcctacgaattttggaaaaataagttcaagcgaaagagc
caggatgaaattgaacaagaagagacggagcggcaggtggttagatacaagcaggtggtc
aaagatgtcaaagacgcgtggggcctggtcagggttgaaattgacaaggagcgtgtgacc
aagtacgaggaggaacagctacagcttggacacaaggccatggacgacatgttcaaccag
gcacaggaaattcttggaggccgcaccgctggtgatggtgcatcttcgctgatgagcgaa
gatcgtaatctcgacgatatggaggatttcgagagcgcggcctcaaatacatctgaacaa
cagcttgatgacgatgtcatgtcttcgagttcagatagtgaaccggaaaacgagcatgac
gatgatgcaaatctcaccgccgaacagctacgcgagaagtatggccagcttcctgattta
ccggtgactagttccgaggatgaggatgattctggagatgaagaggaggaggaaggcacg
cctgcaccgacccctgacccagacattgaaactgaagattttgacgagcccccggaaacg
cttgcgaacggattccatcaccatgaagacaatgaggatgagaaaaagccaggttacatt
gacccagctactgtagaactcgatcaggttgatgacgccctcatggattcagaaaacgac
gataaaagctcggaatccggtagcgaagcttggtcaagcaatgaaggatctgggactgaa
gacgaagacgggaatgacgcagacgattcggaggcagacgacgacgacagcggagaagag
gatgttggcttgatgggtttcttggcacccaaggatgtgaagaagctgaaagaagctgca
aaaacagcaatcgaggataatgagctggagagcgaggaacaaatgacagagcaggttaat
ggcgatgccgccacgtccatgaaggacgaggaagggaaacttcatgccaatggacgtagt
gcagttgccatgaatgatgaaccgtgtgtcaacggaaacgcggcaccatcagagcctgct
ccttccattgaggccgccgagcctcaaacatcggtcgaacccatcgaggctactccaatg
gaagatgttgtgcagtctaaaagtgtccctcggtctcgtcacgcatcctcgccgccgaga
accgaagtcccgttcctgctacgaggcacactccgagagtatcagcacgacggactggac
tggcttgcgaatttgtacgagtccgacaccaatggcatcctagcagacgaaatgggtctt
ggcaagactatacagaccatctcacttctggcctaccttgctgtccgccacgagatctgg
gggccacacttggttgtcgtacccacgagtgtcatgctcaactgggaaatggagttccgg
aaattcctgcctggtttcaagatcctcacttactacggcgacatcaacgagcggaaacga
aagcgattgggatggcgcaacacaggcaaggacatgtacaacgttgtcatcacctcgtac
caactcatacttcaagatgctgcggctttcaagatgcgtccttggcgttacctcgtgctc
gatgaagcccataatatcaagaacttcaagtctcagcgttggcagactatgctcaatctc
cggactgaacgaagactgctgttaactggaacacctctccagaataacattgatgagctc
tggtcgttactgtacttcctgatgccggctggttttgctggagaaggtcgcattgctggc
ttagaagaattcacacttgccctgaagaaccctacatctcaaatcttggatcagggccgt
caacaacttgacgcagaagcacaaaaggttgtcaagcgactccacgaggtgctcaggccg
tatctgctccgaagactaaagtctgaagtcgaaaagcagatgccagggaaatatgagcat
gtagtctactgcaagctctccaaacggcaacgtcagctctacgatgggttcatgggccgc
gcatcgacaaaggagatcttgtcttcaggcaactacatgtccattatcaattgcttgatg
tcactacgaaaagtttgcaatcatcctgatctgtttgaaacgcgagccattgtaacatcc
atggcaatgccaaaatccgttgccgcgcagtacgagatcaaagatcttcttattcgcaag
cgtttgcaagaaggcatggaagacaagagagtaagtttggatgctctgaatctcaatttc
gcgcggcgggagcagacacagttagggcatgctcgacgtacttatccaatccgtgccacg
cggcctttggaagacctgattgagcgtcaaactcgacgcatcaataaaccagtcgaggcg
ggtacgtctccactgcaatcggcaatggcagcgatggccaagcgagagcaggtagctgtc
cgagaccatctacagacatgtgtagctcttacacgcgctcgcacccagttcatgccgata
tacggaaaggacattatcgatgcagtgacagtcgactggcacgagtatacttttggggcc
atcaccgaaggcaaaaaggtacccagaccacgactttaccggccacaccacgctcctcac
ccgacgtatcatggctttggccaggcgcatctgcagccaaggccagaggacgtggtacaa
tacgatgttgttcagcgacatcatggtcgtctcggattcaggtctccacgctctcaaaga
gtcatatcacaatggcacgatcaacaaattacacacttcttcgacatgatcccaacacta
gagcaacgcgctgaagcttttgaacccctaatcacgcgcttcacatgtgttacacccgct
gttgccgccgaggagcttgccccactaactttgtccaaacgtggtgttgatctcatccaa
gcctcagacgcagctcaccaaccggatcccttccactcgtcgcgcatccgacagtccatt
gcctttcctgataaacgcttgcttcagtacgattgcggaaagctgcaacgccttgcaacg
cttcttcgggacttgcaagctggtggtcaccgtgctctcatcttcactcagatgacaaag
gtcctcgatattctggaacagttcctcaacatccacgggcatcgctacttgcgtctcgac
gggtctacaaagatcgaacagcgccagatccttaccgatcgtttcaacaatgacccgcgc
atattatgctttatcttgtcctcgcgatccggtggtctcggtatcaatcttactggtgct
gacactgtcatcttctacgacctcgattggaacccagcaatggacaagcaatgccaggat
cgcgctcatcgaattggtcagacgcgcgatgttcatatttacaagttcgtgagcgagtac
actatcgaagccaacatacttcgcaagtccaatcaaaagcgtctcctcgatgatgtaatc
atacaaaagggtgacttcaccactgatacgttcaacaaagtcacctggcgagacgctttg
gacgaggacatgggtatcgatacgaccgacgaagccggtgcagccatggaacgtgtgctt
ggcgagaagattggcctcttgggtgacgcacgtgtcatgggcaatgttgaagacacggaa
gatcgtactgcggcatctattgcgcaaaaggaaatcgtcgacgaaattcaagaagacaaa
gtcgacttcaacgaaagcgtcaatgcaacacgagctgcttcagaagctgctgccgcctcc
acctccaaagacgaagaagagctggacatccatggcaatgagaagctgaagagacatgtt
gacgagtacatgttgagcttgtaccgtgaggaatttggcaaagagccgtatcggccgcca
acggatcggcaaaagagaaaccgcaaggggcaggatccgcatgttaggcagcgcaaaaag
aagtattaa
DBGET
integrated database retrieval system
