Bipolaris sorokiniana: COCSADRAFT_41143
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Entry
COCSADRAFT_41143 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bsc01009
]
COCSADRAFT_41143
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_41143
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_41143
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_41143
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
COCSADRAFT_41143
Protein phosphatases and associated proteins [BR:
bsc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
COCSADRAFT_41143
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
COCSADRAFT_41143
Membrane trafficking [BR:
bsc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
COCSADRAFT_41143
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
COCSADRAFT_41143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Arb2
DUF7607
Motif
Other DBs
NCBI-GeneID:
19139921
NCBI-ProteinID:
XP_007704863
JGI:
Cocsa1_41143
UniProt:
M2QW05
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MDDEDFPMGEDSIIISTEPNGDHAPETIVTSKIFGSSKGPPLSKQEQLPFHSPSKGPLLQ
PNIHRSNPGSHRTTKSPSSWSDKMNASRLTPAQQSSPQVRVPPKPRSTLIYPTSKTGLVY
DPRMRFHAELPDMNINPDDIHPEDPRRIHSIFEELKQAGLVASSTSEEDKEDHCWRIAAR
FATRPEILLIHTEEHYDLVESFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEA
CKAVVQGAVRNAIAIIRPPGHHAESDQPSGFCIFNNVPIAARVCQNAYPETCRKVLILDW
DVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKNVNIPWAEH
GMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHMLMS
LAKGKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPAPKDSAVYIVENVKRQH
SKYWKSLYPKHLDKTDPGYQDAYRFHEIIREWQSQRLAAEHSMVPLPPLQINKAGLAQTF
EHNIIATPKFMEQYPLLVIFHDPPSLQDHSDPMSGKRELHNTWLRYIDWAIENDFQVIDV
NIPRVVAVEDPNIGFTKSDNSVVRAQQTRELASYLWDNYIEPNEATQVFLMGVGDAYLGL
VDLLSHNENCTDPDSPVECLIGFVAETTIQSIKRATDDTISSWYYSHSMIFVKNSHFVWD
PSRQRKMRKKLGNLIKSSQDTLDDMLEQHLEEVQELLLEKKSEFEEMNDISSRTDEGPQT
TAMGLQSSPLPRAPYDSKRFEPSARQENTVNALKSPKMPAVGLFAVSPKTSGTRSPMKRP
SS
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaagacttcccgatgggggaagactcaataattatctccacagagccaaac
ggtgaccatgcaccagaaacaatcgttacttctaaaatctttggcagtagtaagggccca
ccgctgtccaaacaagagcaactacccttccatagtccatccaaaggtccattgttgcag
ccgaatatacatcgaagtaatcccggatcccaccgaacgactaaatcgcctagtagctgg
tcagataagatgaatgcatcgagactgactccagctcaacagtccagcccgcaagtccgc
gtacctcctaagccacgttctacacttatttacccaacgtcaaaaacgggactcgtttac
gaccctcgtatgcgatttcatgccgaactcccagatatgaacatcaacccagacgacatt
catcctgaagaccctcggcgtatccattcgatttttgaggagctcaagcaggctggtcta
gtggcttctagcacttcagaagaagacaaagaagatcactgttggagaattgcggcacga
tttgccacaagacctgagatactgctcattcatactgaagaacattacgaccttgtggag
tcattccaaaatatgacctcagacgagttaaaattcgaagctgagcggcttgattcaatc
tatctcaacaactcgacctacgaatgtgctaagctcgcagccggtggtgctattgaagct
tgtaaagcggtagtacagggagctgtgcgcaacgccattgctatcatccgccctcccgga
caccatgcggaaagcgatcaaccgtcaggattctgcatcttcaacaatgttccaatcgct
gcccgtgtgtgtcagaatgcttatccagaaacttgtcgcaaagtcttgattttggactgg
gatgtacaccacggcaacggcatacaacatgctttctacgatgaccccaatgtcctttac
atatcgctgcatgttttcaaggatggaactttctatcctaatctacccgacggcaacctc
gactattgcggtgaaggccgtggcgaaggaaaaaatgtgaatattccatgggcagaacat
gggatgggcgattcagaatacctttacgctttccagcaagtcgttatgccgatcgctaca
gaatttaaccccgatcttgtcatcatttcagctgggtttgatgcagccgagggcgactta
ttgggtgggtgttttgttacgcctgcatgctatggtcacatgacacatatgcttatgagc
ctagccaagggaaagctcgttgtatgtctcgaaggtggttataatctgcggtcgattgca
cgctctgcgctagcggtaaccaaagttctcatgctagagcctccggatcgcttgcgtgat
gaccttccagcaccaaaggatagcgctgtatacattgtagagaacgtcaaacgtcagcat
tcaaagtattggaagtcgctttatccgaaacacctggataaaacagaccctggataccag
gatgcgtaccggtttcacgaaatcatccgagaatggcagagtcaacgtctagctgcagag
cactcgatggttccccttcctccccttcagatcaataaagctggcttggcacagacgttt
gagcacaatatcatcgccacaccgaagttcatggagcaatatcccctacttgtgatattt
catgacccaccgagtctccaagaccactctgatcccatgtctggcaagagagagctacac
aatacatggctcaggtacattgattgggccatcgaaaatgacttccaggtcattgacgtt
aatattcccagagtggtagcagttgaggatccgaacattggtttcacaaaatcagacaac
tcggtggttcgtgcgcagcaaacacgtgagctcgcgagctatctatgggataactatatt
gagccgaacgaagcgacacaagtcttcctaatgggcgtcggtgatgcctatctcggactt
gtagatttgcttagccacaacgaaaattgcaccgatcccgatagtccggtcgagtgtctt
atcggttttgtggctgaaacaacgattcagtcgataaagcgagcgacagacgacaccatc
tccagttggtactactcgcattcaatgatattcgtaaagaatagtcactttgtttgggac
ccgagccgccaacgtaagatgcgcaagaagctcggaaatcttataaagtcatctcaggat
acactagatgacatgttggagcagcatttggaagaagtacaggaactgcttttggagaaa
aagagcgagttcgaagagatgaatgatatatcaagtcgtactgacgagggaccgcagacc
acagccatgggactgcagagttcacccctcccaagagccccttacgattcgaagagattt
gagcccagcgccagacaagaaaacacggtcaatgcactgaaaagccctaagatgccagcg
gttggtctgttcgccgtaagtcccaagacttcagggaccagaagtcctatgaaaagaccg
tcttcataa
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integrated database retrieval system
