Bipolaris sorokiniana: COCSADRAFT_41270
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Entry
COCSADRAFT_41270 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K15171
transcription elongation factor SPT4
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCSADRAFT_41270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_41270
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_41270
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
COCSADRAFT_41270
RNA polymerase I system
COCSADRAFT_41270
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
COCSADRAFT_41270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
Ig_TMEM132_5th
Motif
Other DBs
NCBI-GeneID:
19139950
NCBI-ProteinID:
XP_007704892
JGI:
Cocsa1_41270
UniProt:
M2RWG6
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MAGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFE
GLITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGINYVPRDGSEQDM
LPKD
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggcgcgtacatcccccccaaccagcagcgcaacatgcgcgcctgcatggtc
tgctccattgtccgcacccagcaacagttcctgtctcagggctgccccaactgcgaagag
tttcttgagctcaccggcaacccggagcagatcaacgactgtacctcgcaagtctttgaa
ggcctcatcactgtcgcagacaccaccaagagctgggtggccaggtaccagcgcctcgag
ggctaccagccgggtgtgtacgcgacccaggtcgagggtatccttcctgatgacattatt
ggcttgatcgagagcgccggcatcaactacgtaccgagagatggcagcgaacaggacatg
ctgcccaaggattaa
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integrated database retrieval system