Bipolaris sorokiniana: COCSADRAFT_42002
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Entry
COCSADRAFT_42002 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K08516
synaptobrevin homolog YKT6
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04130
SNARE interactions in vesicular transport
bsc04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
COCSADRAFT_42002
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
COCSADRAFT_42002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bsc04131
]
COCSADRAFT_42002
Membrane trafficking [BR:
bsc04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
COCSADRAFT_42002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
DUF1580
Motif
Other DBs
NCBI-GeneID:
19140137
NCBI-ProteinID:
XP_007705962
JGI:
Cocsa1_42002
UniProt:
M2SNH4
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MKLVYIGVFKNDTKDAIELTGAENLKSINRWVQKGVKEGIVFASAVVAKRTPPHKMTDVL
ENGHKFHALASADPICAVVVTDDEYPSSAAHRIVRKVLDEFSAKYPRSAYSGFTADATKL
SYPELKEYVEKYQDPETVDATIKIQRELDETKVVLHKTLESVLERGEKLDDLVQKSEGLS
AQSKMFYTQAKKQNSCCTVM
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtttacattggcgttttcaagaatgacaccaaagatgccatcgaactgacg
ggcgcggaaaacctcaaatcgatcaatcgatgggtacaaaagggcgtcaaagaaggcatt
gtctttgcttcggccgtggttgctaaaagaacacccccgcataagatgacggatgtcctg
gaaaatggacacaagtttcacgccttggcttccgccgatcccatatgtgctgttgtcgtg
accgacgatgaataccccagcagtgccgcgcatcgcattgtccgcaaggtccttgacgag
ttctccgccaaataccctcgctctgcctacagcggcttcacagccgacgccaccaaactg
tcgtatcccgagctcaaagaatatgtcgagaagtaccaggacccggaaaccgtcgatgcc
acaatcaagatccagcgggagcttgacgaaacaaaggtcgtactacacaagactctcgag
agcgtcttggagcgtggagagaagctggacgatttggtccaaaagagcgaggggctgagt
gcgcagagcaagatgttttacacccaggctaagaagcaaaactcgtgctgcacggtcatg
tga
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integrated database retrieval system
