Bipolaris sorokiniana: COCSADRAFT_44824
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Entry
COCSADRAFT_44824 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_44824
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bsc01002
]
COCSADRAFT_44824
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_44824
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_44824
Peptidases and inhibitors [BR:
bsc01002
]
Metallo peptidases
Family M1
COCSADRAFT_44824
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCSADRAFT_44824
Coactivators
SAGA/TFTC/STAGA complex
COCSADRAFT_44824
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
COCSADRAFT_44824
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
19140198
NCBI-ProteinID:
XP_007701106
JGI:
Cocsa1_44824
UniProt:
M2S7I1
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MDDASSGDSFTLLKQQLELDFSFAPRRVKGLTTLDIQPDQAQLRDITLNCRQLRPTSIRI
QGEKAAFSYSNLHQRLTLYPGTGLEQYHFLKQRIARHTSGAEDELVITVPDRVRIREVKP
SEAGMTDDAPGTFYAPLKLEIEYELEDFRDALHFVGVEDGDARFPHAYTRNSSFPGTASC
LFPCIDDGETRCIFEVSIRYPRTLGDALSKPSPPNANPNGSPADGVDKADSVMLDVDDEQ
TDLSEEEKAMEMQVICSGTLTDDILDPADPARKTASFSCDTPVLPQHIGFVIGPFEHVDL
SEYRDTLDDERLGENAIKVHAFCLPGKENEVRNSAMMLARALDTFTERFQSYAFGNSYKL
AFVDDLDCDTAHTASFSICSSRLLFPETVWEPLEHTTRVLVHAVASQWIGVDVIAHNLED
YWIIVGGSWFMAELYLKELFGRNDWRFRQKLMVDKVIYMDRKRPSLQQLAEHMQLDPREA
EFMELKSLMVLSILHNRLVKQSGKNGVDRCLYRMLFNARQGKYPNGAVTTDDFLDICEKV
GHQKLESFFQQWIVGAGCPTFHCVPSFNKKKQVVQLTIKQLQADSSITTIENGLAADDFM
REAKQKSRDLRSATGYPTFVGPMTIRIHEADGTPYEHIVDINSNNVKVEIPYNTKYKRLK
RNRLNKERMAAAAGLDASGETQEDVTFYMLGDLFTSPQEHEEWRLDDWPQKDEAKQEGEA
YEWIRIDADFEWICRTNIEDMPSYMYVSQLQQDKDVVAQAESIQFLANKEGHPLISTFLV
KTLMDNRYFHGIRTMAAMVLAQSALKRTQWVGLFHLKKAFRELFCLPNSPMTRSNDFSDR
SMYLIQCAIPRAIAKIKGEDGRSPLEAKRFLLDLVRYNDNRGNDYSDDHYIATLMRCLAE
TLTKTNIGSELSHEEWAQEQDFTNKAIGELTRHQRLDEWIPTYQNVYTTTALDCAFKLVT
SRVTPFKPTEFLQYAQLGNADNVRLKAWECLIRLGMFRKDSVMRFLVHEIRSDPSPYFRK
QMLRILGLAIGQVATGDVWAPEKAAETAADTLVVENEASNAERASALARQNLNGALRGLK
SDLQGNKTLRSVLEEALKSTTLSVNDMSEILDICDMIFDNQKVNKLPVKLALPRYWTVEH
LGKAVLRFKQTKKYRTT
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcctcgtcgggcgactcttttaccctgctgaagcagcagctcgagctcgac
ttcagctttgcaccgcgccgggtcaagggcctgaccacgctcgacatccagcccgaccag
gcccagctgcgagacatcaccctcaattgccgccaactccgtcccacgagcatccgtatc
caaggcgagaaggccgcctttagctactcgaatctgcaccagcgcctaaccctctacccc
ggcaccggcctcgagcagtatcacttcctcaagcagcgcatagcgcgacacacctccggc
gccgaggacgagctggtcattacagtgcctgacagggtcaggattcgggaagtgaagccc
tcggaggctggcatgacggatgacgcaccaggcaccttttacgcgccgctgaagctcgag
atcgaatatgaactagaagatttccgggacgcgcttcactttgtcggtgtcgaagatgga
gacgctcgcttcccgcatgcatatacgcgcaactcatctttccccggtaccgcatcttgc
ctgtttccctgtatagacgacggtgagacgaggtgtatcttcgaagtctccattcgctac
ccgcgcacgctgggcgatgctctcagcaaaccctcgccaccgaatgcgaaccctaatgga
tcaccagccgatggagtcgataaagccgacagtgtcatgttggatgtggatgatgagcaa
actgatctatccgaggaagagaaggccatggaaatgcaagtcatttgttccggcacgttg
accgatgacattctcgatcctgccgacccagcccgaaagactgcaagcttctcatgcgac
actcccgtcctcccccagcacattggctttgtcatcggacctttcgaacatgtcgacctc
tccgaataccgtgataccctggatgacgagcgcttgggcgaaaatgctatcaaagtccac
gcattctgcttgcccggtaaggagaacgaggtccggaacagcgccatgatgctcgctcga
gctctcgataccttcacggagcgatttcaaagttatgcttttgggaattcctacaaactc
gcatttgtagacgatctggattgcgatactgcgcacacagcctcgttttcaatctgcagc
tcgcgcctgctcttcccggaaaccgtttgggagccactcgagcacacgaccagggtattg
gtacacgcagtagctagccagtggataggcgtggatgttatcgcacacaatctagaagac
tactggatcatcgttggtggctcgtggttcatggccgaactgtacctcaaagaactcttt
ggtcggaatgactggcgcttcaggcaaaaattgatggtagataaggtcatctacatggac
cgcaagcgcccgtcgcttcagcaacttgcagagcacatgcagttggatcctcgtgaggcc
gaatttatggaactcaagtcgcttatggtcctctctattctgcataaccgcctggtaaaa
cagagcggcaagaacggtgttgacaggtgcttgtaccggatgctgtttaatgctcggcaa
ggaaagtaccccaacggcgccgtcaccactgatgactttcttgatatttgcgagaaagta
ggccaccagaagctcgaatctttctttcagcagtggattgtaggcgcagggtgccccaca
tttcactgtgttccttcgttcaataagaagaagcaagtggttcagcttaccatcaaacag
ctccaagccgactcatccattacaacaattgagaacggtcttgcggcagatgacttcatg
cgcgaagcgaaacagaaatctcgcgacttgcggtcagcaacaggatatcccactttcgta
ggccccatgactatcaggatccacgaagccgatggcaccccctatgagcatattgtcgac
atcaactcgaataatgtcaaagttgagattccgtacaataccaaatacaagcgattaaaa
aggaatcgattaaacaaggagcgtatggccgctgccgctggtctcgatgcttccggcgaa
acacaagaagacgtcacattttacatgttaggagacctgtttacttcaccccaagaacac
gaagagtggcgactcgacgattggccacagaaagacgaagctaagcaggagggggaagcg
tacgagtggatccgcatcgacgcagactttgaatggatatgtcggaccaatattgaagac
atgccgtcgtacatgtacgtctcgcagttgcagcaggacaaggatgttgttgcacaagca
gagtccatacagtttcttgccaacaaagagggccaccctttgatctccactttcctggtt
aagacgttaatggacaatcggtattttcacggtatacggactatggctgccatggtcctt
gcccagagcgcgctgaagcggactcagtgggttggactcttccacttgaagaaggctttt
cgtgagctgttctgcttgccaaactcgccaatgactcgatcaaacgacttttctgaccgc
agcatgtatctgatacaatgcgctattcctcgggccattgctaagatcaagggcgaagac
ggcagatcaccactagaggctaagcgtttcctactggatcttgtgcgatacaacgacaac
cgcggaaatgattacagcgacgaccactacattgccacactgatgcgatgtctggccgaa
accctgaccaagacgaatataggttctgagctcagccacgaagaatgggcgcaggaacag
gactttaccaacaaggctattggagagcttactcgacaccagaggcttgacgaatggatc
cctacataccagaacgtgtacacgaccactgcgctcgactgtgcgttcaagctggttaca
agccgagtgactcccttcaaacctaccgagtttctgcagtatgcgcaactagggaatgca
gacaatgtgcgcttaaaagcatgggagtgtctcattcggctgggcatgttccgcaaagat
tcggtcatgaggtttctggtacatgagattcggtctgatccttcaccatacttcagaaag
caaatgctacgtattcttggccttgccatcggacaggtggctactggcgatgtttgggcg
ccagaaaaggctgccgaaactgctgcagacacgctggtggttgagaatgaagcgagcaac
gccgaacgcgcctccgcccttgctcgtcagaaccttaacggggccctgagagggttgaag
agtgacttgcaaggaaacaagactttgcggtcggtactcgaagaggcactcaagtccaca
actttatctgtcaacgacatgtctgagatcttggacatatgcgatatgatctttgacaac
caaaaagtcaacaagctgccagtcaaattggcccttccacgttactggactgtagagcac
ctcggaaaagccgtgctgcgcttcaagcagaccaagaaatataggacaact
DBGET
integrated database retrieval system
