Bipolaris sorokiniana: COCSADRAFT_77485
Help
Entry
COCSADRAFT_77485 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03013
Nucleocytoplasmic transport
bsc03015
mRNA surveillance pathway
bsc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCSADRAFT_77485
09122 Translation
03013 Nucleocytoplasmic transport
COCSADRAFT_77485
03015 mRNA surveillance pathway
COCSADRAFT_77485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_77485
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_77485
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCSADRAFT_77485
Spliceosome [BR:
bsc03041
]
Complex C
Other components
EJC/TREX
COCSADRAFT_77485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
19140613
NCBI-ProteinID:
XP_007694796
JGI:
Cocsa1_77485
UniProt:
M2RSC0
LinkDB
All DBs
Position
Unknown
AA seq
158 aa
AA seq
DB search
MEEDAKMDIDQPEQQDVPAADPKASDAQTAAGATAVRSIEGWIIIVTNVHEEATEEDLQD
MFGEFGTVKNLHMNLDRRTGYVKGYALIEYATLDEAKAAIKGASGEELLEQKVTVDYAFV
RPPPASKGRARDHDRRQSGRGAARARSRSPGRDEIDDE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgccaaaatggatattgaccagcctgagcagcaagacgtgccggctgcc
gaccccaaggctagcgacgcgcagaccgcggcgggcgcaacagctgtgcgctccatcgag
ggctggatcatcattgtcaccaatgttcatgaggaggcgaccgaggaggatctccaggac
atgtttggcgaatttggcaccgttaagaacttgcacatgaacctcgaccggcgcacgggt
tatgtcaagggctacgcactgatcgaatacgccacattggacgaagcaaaggcggccata
aagggcgccagcggcgaggagcttctcgagcaaaaggtcaccgtcgactacgcctttgta
cgaccaccaccagccagcaagggtcgtgcgcgcgaccatgacaggagacagagcgggcgt
ggtgcggctagggcgaggagcaggagtccgggtcgcgacgaaatagacgacgagtag
DBGET
integrated database retrieval system