Bipolaris sorokiniana: COCSADRAFT_78008
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Entry
COCSADRAFT_78008 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_78008
03041 Spliceosome [BR:
bsc03041
]
COCSADRAFT_78008
Messenger RNA biogenesis [BR:
bsc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
COCSADRAFT_78008
Spliceosome [BR:
bsc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
COCSADRAFT_78008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
19140639
NCBI-ProteinID:
XP_007694663
JGI:
Cocsa1_78008
UniProt:
M2TJC3
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MAAPPDLNAILAALAAGRPSTTPSQTPQQAPPAQHPPPQALPPGFPGAMPTATPPAMPGY
SFPQPTHSGSLDLSAIKPVSSGSVSIQDALAKARGFAAQKGLAHEAARPGIAEPWSGYGI
PAQTYTPPAYQEDPRLSGRQPYRRSRSRSRSPARREPVRESYNPYRDERRDERRGGYGRE
RDRSPPRRDTFSPAQQYGQARSPPANDNSEVILIDSSLVGLVIGRQGESLRRIEQESQTR
IQFINGPESGPQRECRITGSPSARISAKREINRIIEENGGNPARETGRNARPAAKTVGQQ
QPALREGEQSSQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLI
GSPAAAAHAKELIMEIVDSDTKQMEGTGNQQPPSQQPFNTRRDNFDPYAAGAGGAGAGKI
NDSIHVPSDAVGMIIGKGGETIKSMQSETGCKINVSQASGADIEREIGLVGTRQAIDDAK
RAIWEKVDQVREKNNSRRRDNGNQDNGYSHQQTPSYGQAAAPAQAPQAAAPAAGGAAADP
YAVYGGYQNYLAMWYASIAQQQQGGQGAQGPPGA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctccagacctcaacgccatcctggcggctcttgccgccggccgaccgtcg
accacaccatcccagacaccccaacaggctccgcctgcacagcatccccctccgcaagcc
ctgccaccaggcttccctggcgcaatgcctactgccaccccgccagccatgccgggctac
agcttcccacaacccacacactctggcagtcttgaccttagtgctatcaagcccgtgagc
tctgggtctgtaagcatccaggatgcgctggcaaaggcgcgcggttttgcagcccagaaa
ggccttgcccatgaagcagcgcgcccaggtattgctgaaccttggtctggttatggtatc
ccagcgcaaacttacacgcctccagcttaccaagaagacccgcgcctcagtgggcgccag
ccttacagacgttctcggtcgcgttcgcgctctccagcgcgccgagaacccgtgcgtgaa
agctacaatccataccgcgatgagcgtcgtgatgagcgccgaggcggctatggtcgtgaa
cgtgatcgctcgccccctagacgtgacaccttctctcccgcccagcaatacgggcaggct
cgttcgccccctgccaatgataactctgaggtgattctcattgactcttcgttggttggt
cttgtcattggacgtcaaggtgagagtctccgccgcattgaacaagaatcccagacacgt
attcaattcatcaacggccccgaatctggacctcagcgcgaatgccgtataactggcagc
cctagtgctcgtatcagtgccaagcgcgagatcaaccgtatcatcgaagagaatggtgga
aaccctgctcgtgagactggccgcaatgctaggcctgccgcaaagacggtcggccagcaa
caaccggctcttagagaaggcgaacagtcgtcgcagattatggtgcccgatcgaaccgtt
ggtctcatcatcggccgcggtggtgagactattcgtgatctgcaagaacgcagtggctgc
cacgtcaacattgttggtgaaaacaagagtgtgaacggtctgcgtcctgtgaacctcatt
ggaagtcctgctgctgctgcccatgccaaggaactcatcatggaaattgtcgatagtgac
actaagcaaatggaaggcaccggcaaccaacagccgccgtcgcagcaacctttcaacacc
agacgtgacaactttgatccctacgccgctggtgctggtggcgccggcgctggcaagatc
aatgatagcattcatgttccatctgacgctgttggcatgattattggcaaaggcggtgaa
accatcaaatccatgcagtccgagactggctgcaagatcaacgtttcgcaagcatctggc
gctgatatcgagcgcgagattggccttgttggaacacgtcaagccattgatgatgccaag
cgagcaatctgggagaaggttgatcaagtgcgggaaaagaacaactcgcgccgacgtgat
aatggcaaccaggataatggctactcacatcaacagacaccatcatatggacaggctgct
gcgcctgcacaagctccgcaagccgctgcccccgctgcaggtggcgctgctgctgacccg
tacgccgtttatggcggctaccagaactacctagcaatgtggtatgcatccattgctcag
caacaacaaggcggccaaggtgcccaaggacccccaggcgcatag
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