Bipolaris sorokiniana: COCSADRAFT_78797
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Entry
COCSADRAFT_78797 CDS
T03124
Name
(RefSeq) polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
COCSADRAFT_78797
Enzymes [BR:
bsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
COCSADRAFT_78797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
Motif
Other DBs
NCBI-GeneID:
19140681
NCBI-ProteinID:
XP_007694534
JGI:
Cocsa1_78797
UniProt:
M2RRC1
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MRAITVTATLLFCANTWAFLKASQNNRSLTIANERLVASVSKSKGYINVLTLDGQNLLGT
ESSNTGVGPYLDCYCTPSGFWTPGRGKDVQYQLFNGTDSTGTPYGGISMGETYAPTGQRL
EQYWFLREGETGLHTFSRIVYHNETTPFLRNLQEFRTLFRPNHDPPLFTHFVTNDKFSAP
RPDLNGQVVVQDATWKLANKDDPYVKGVGDYFTKYTFQDSWRNHLAHGMYADGRTTNGTT
YGAWLVHNTVETYFGGPTHSDLVVDGIVYNYMVSNHHGAQTPNITSGFDRTFGPQYFHFN
AGGTLSELRKDAEQYGQRPDWNAPFYDSIAPHVPNLVASSSRGTFEAKITLPPGAQNPIA
ILTTTGHNYQDNAANSTAYQYWTPIPSSGAISILRVKPGSYRLTLYANAIFGDYVRDSIS
ISPSHTTFVNVTWTPQTAGKEIFRIGTPDKSSGEFRHGTTPSRTHPLLTEEYRLYWAAYD
FITDFPSGITFKVGKDNESTALNYVHWSVFGGKANSVRPVPVPDHVYDWTLLFDLGEEDV
REGGKATFTVQLAGAKTAAGNTDLDTGERWSNLPLTVSVNGEVLEAWVVPYYQSSSCAVR
SAVSCYHLSHKFEFPGDLLKEGENEIVLGLPYNATGNESAVLPEAVYVQYDALRLEVE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctattacggtcacagcgacgcttctattctgtgccaatacatgggcctttctg
aaagccagtcaaaacaatcggagtctcactattgctaatgaacgtctggttgcatcggtg
agcaaatcgaaagggtatatcaatgttttgacactcgacggccaaaaccttctcggaaca
gaatctagtaatactggtgttgggccatatcttgattgctactgtaccccgagtggcttc
tggacgcctggtcgtggtaaggatgttcaatatcaactattcaatggcaccgactcaacc
ggcactccgtacggcggtatcagcatgggagaaacgtatgcgcctactggccaacggctg
gagcaatactggtttctaagagaaggagagaccgggctccacactttcagtcgaatagta
taccacaacgagactacgccgtttttgcggaacctgcaggagttccggactctattcaga
cccaaccatgaccctccacttttcactcactttgtcactaacgacaagttttctgcgcct
cgtccagatctcaacggacaagtagtagttcaagatgccacctggaagctcgccaataag
gacgatccatacgtgaagggtgtaggagactatttcaccaagtacaccttccaagatagc
tggcgcaaccacctcgcccacggcatgtacgccgacgggcgcaccacaaacggcaccacc
tacggcgcctggctcgtccacaacacagtcgaaacctacttcggcggccccacgcactcg
gacctcgtcgtcgatggcatcgtctacaactacatggtctccaaccaccacggcgcccaa
accccaaacataacctcgggcttcgaccgtacctttggtccgcaatacttccacttcaat
gccggcggtaccctctctgagttgcgtaaagacgcagaacaatacggccagcgtccagat
tggaacgcacccttctacgactccatcgccccgcacgtcccgaacctcgttgcttcctcc
tcccgcggtactttcgaagcaaaaatcactcttcctccaggtgcacagaaccccatcgcc
atcctcaccaccaccggccacaactaccaagacaacgctgcaaacagcaccgcatatcaa
tactggaccccgatcccttcttcaggcgccatttccattctacgcgtgaaaccaggatcc
taccgcttaaccctctacgcaaacgccatattcggagactacgtccgcgactccatctct
atatccccctcccacaccaccttcgtaaacgtaacatggacgccccagacagcgggaaag
gagatcttccgcatcgggaccccagacaaatcctccggcgagttccgccacggcactacc
ccctcacgcactcacccactgttgacagaagaatacagactctactgggctgcgtacgat
ttcatcacggattttccatcaggcatcacgttcaaggtgggaaaagacaatgagagtaca
gcgctgaattacgtccactggtccgtctttggcgggaaagcgaatagcgtgcggcctgtc
ccagtgccggatcatgtgtatgattggactttgctctttgatttgggagaggaggatgtg
agggaggggggcaaagcgacgttcactgtgcagcttgcgggtgcgaagacagcggcgggg
aatacggatttagatactggggagaggtggtcgaatcttccactcactgtctctgtcaat
ggtgaggttttggaggcatgggtcgttccatactaccagtcttcctcgtgtgctgtgcgt
tcagcagtctcgtgctaccatctgtcgcacaaattcgagtttccgggggacttgttgaag
gagggggagaatgagattgtgttaggattgccgtataatgcaacgggaaacgagagtgcg
gtactacccgaggcggtgtatgtgcagtatgatgcgttgaggttggaggtggagtaa
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