Bipolaris sorokiniana: COCSADRAFT_79983
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Entry
COCSADRAFT_79983 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc04120
Ubiquitin mediated proteolysis
bsc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCSADRAFT_79983
04120 Ubiquitin mediated proteolysis
COCSADRAFT_79983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bsc04121
]
COCSADRAFT_79983
Enzymes [BR:
bsc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
COCSADRAFT_79983
Ubiquitin system [BR:
bsc04121
]
Ubiquitin ligases (E3)
U-box type E3
COCSADRAFT_79983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF2203
FAD_SOX
Motif
Other DBs
NCBI-GeneID:
19140758
NCBI-ProteinID:
XP_007696014
JGI:
Cocsa1_79983
UniProt:
M2SMK4
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MADQDANQQSHPGHDDTPMPDAAPAPNAMSDADKIRAKRLAKLGGPPPQSSSTPSEAASS
AAPSPKPAQSQLPPPKPQAQTQNPFSQLGVKPNAPPKNTITIKPAQSSSGASAPSPAPKA
QEMSIEAWEDRTLSNIFRITLDEAHARESHGNKLFYVAGAKSDLEDEGRPLRFTTDMLDS
VILEAASSHAHGTALDYLLACWKRVTRVLKTLTNKTGPRFDVVKEARRLCFSYCIFAFTM
PDMFGEDAPAENAMADRLLLGPDDERGICYEFLTEASQRIADDDSIKEALVGGMEHVSRR
LASVSMNGDYRQHMLILRIFVRFPPLVAALAQSETFLPADIEPQHIETHSFLGPFFRLSP
MQPEVAMNYFSGSAAIDKGLVANAQRAVRMTLQTHQEELFDITNTFIKNRESREKMLDWL
ALTVNKNHKRRAMQVDRKTVSSDGFMVNVTVILDRLCEPFMDATFSKIDRIDIDYLRRSP
RVDIQDETKINADQKTSDDFYSTKASGTNNFISEVFFLTVAAHHYGLEAANSKLSSLQKD
VKWLEKELAKLEPERPKYMTNPAQLALFDNHIKKVKEQIERGKCSILAIQGVLLDETTQA
RSMQLMRYVIVWLLRLANPGTSFPKTELQLPLPKDQPVQFKCLPEYFVEDIVGNFKFITR
YMPHIITTTQCEELVKICIAFLRSSEYIKNPYLKSGLVTILFHGVWPIPGRSKGVLGDTL
FAHDFAMKHLLHALMKFYIECESTGTHTQFFDKFNIRYEIFQVIKCIWPNPIYREHLATE
ARVNLDFFVQFVNLLLNDVTFVLDESFSAFKEIHDLSKELKNAPADMDQTARQEQEEKLS
SAQGKAKSYMQLTNETVAMLKLFTETLADSFTKKEIVVRLAHMLDYNLEALVGPKKSQLK
VENPEEYGWNPRNMLAELTDVYLNLQGKQSFVDAVATDGRSYRPEYWDEAYKILQRFKLK
SPEQMEQWQKMATDIKAAKDQADMVEADLGDIPENYEDPLMASLMEDPVILPISKQVVDR
STIQSHLLSDPHDPFNRTPLKIEDVIPNDALREEIQAWKQNRLAQKMAERNAGAAASASE
AMDTS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaagatgccaaccaacaaagccatcccggccatgacgacacccccatgcca
gatgcagcgcctgcccccaatgccatgtccgatgctgacaaaatccgtgcaaagcgtctt
gcaaagctcggtggtccccctccacagtcgtcctcaaccccgtccgaagccgcctcgtcc
gctgctccctcgcccaagcctgcacaatcgcagctaccgccgcccaagccgcaagcccaa
acccaaaatcctttctcacaactaggtgtcaaacccaatgcgcctcccaagaacacaatc
accatcaagcccgcacagtcttcaagcggtgcctcagccccctcacccgccccaaaagcc
caggaaatgagcatagaagcatgggaggatagaactcttagcaacattttccgcataacg
ttggacgaggcacacgccagggaatcacatgggaacaagctcttctatgttgctggcgca
aagagtgatctcgaggatgagggccgcccgcttcgctttaccaccgacatgctcgactcg
gtcatactggaggcggcatccagccacgcccacggcactgcattagactatctgctcgcc
tgctggaagcgcgtcactagagtcctcaagaccttgaccaacaagaccggccccaggttt
gatgttgtcaaggaagcccgaagactgtgcttcagctactgcatattcgctttcactatg
ccagacatgtttggtgaagatgcccctgctgagaatgcaatggctgatcgcctactactt
ggtcctgacgatgaacgcggcatttgttacgaatttcttactgaagccagccagcgcata
gccgatgatgattctataaaggaggcgctcgtgggcggcatggaacacgtgagccgccgt
cttgcttcggtctcaatgaatggtgattatagacagcacatgttgatcttgcggatattc
gttcgtttcccaccacttgtcgctgccctcgctcagtccgagaccttcttgcccgccgac
attgagccccagcacattgaaacccacagcttccttggcccctttttccgtctgtctcct
atgcagcccgaagtggctatgaactacttttcgggatcagcagccattgacaaaggcctt
gttgcaaatgctcagcgggcggtccgcatgactctacagacccaccaagaggagttattc
gacatcacaaacacctttatcaagaacagggagtctcgcgaaaagatgctcgattggcta
gcactcacagttaacaagaaccacaaacggcgtgccatgcaggtcgacaggaagacggtc
tcctctgacggcttcatggtcaatgtcacagtcattctcgatcgcctttgcgagcctttc
atggacgccaccttctccaagatcgatcgcatcgatattgactatctgcggcgctcacct
cgtgtcgatatccaggatgaaaccaagattaacgctgatcaaaaaacttcggatgacttt
tacagcaccaaagcttcgggcaccaacaacttcatcagcgaagtcttcttcctgactgtg
gcagcacaccactacggtctcgaagcggcaaactccaaactaagctccctgcaaaaagat
gtcaaatggctggagaaggagctggctaaactggaacccgaacgaccaaagtacatgaca
aaccccgcgcagcttgccctctttgacaatcacatcaagaaggtcaaggagcagattgag
cggggcaaatgcagcatactggctatccagggtgttttgcttgatgagaccacacaagct
cggtcgatgcaactgatgcgttatgtcattgtctggctgctacgacttgctaatcctggg
acatcatttcccaagacggaactacagctgcctcttcccaaggaccagccagtacaattc
aagtgcctcccagagtactttgtcgaggacattgttggaaacttcaagttcatcacccgc
tacatgcctcatatcatcacaaccacccaatgcgaggagcttgtcaagatttgcattgcc
tttttgcgcagttccgaatacatcaagaatccgtacctgaagtccggactcgttaccatt
ctattccatggagtatggccaattccggggagatcaaagggcgtactaggagacacgctg
tttgcgcacgatttcgctatgaagcacctgttgcatgcgcttatgaagttctacattgag
tgcgaaagcaccgggacccacacacaattctttgacaaatttaatatccgatacgagatt
tttcaggttatcaagtgcatctggcccaatcccatttatcgtgagcatctcgccacggaa
gcccgcgtcaacttggacttcttcgtccaatttgtcaacttgcttctcaatgacgtcaca
ttcgtcttggacgaatcattcagcgccttcaaggagattcacgatctctcaaaagagttg
aagaatgcgccagccgacatggatcagacagcgcgtcaagaacaggaggagaagctgtcg
tctgcacaaggcaaggccaagagctacatgcaactcactaacgagactgttgccatgttg
aagctctttaccgagacgctggcagattcgtttaccaagaaggaaatcgtcgtgcgactg
gcacacatgctggactacaacttggaggctcttgtaggtcccaagaagtcccagctcaag
gttgaaaaccccgaggaatacgggtggaacccgcgcaacatgcttgcagagctcactgat
gtctatctcaatctacagggtaaacagtccttcgtcgatgccgttgccacagacggacgg
tcctaccgcccagagtattgggatgaagcctacaagatcctacagcgcttcaagctcaag
tcgcccgagcaaatggagcagtggcagaaaatggccaccgatattaaggcagccaaggac
caggctgacatggttgaggctgacctcggcgatatccccgaaaactacgaggatcccctg
atggcatcgctcatggaggaccctgtcatcctaccgatcagcaaacaggtggtcgatcgc
agcaccatccagtctcatcttctcagcgacccgcatgaccctttcaatcgtacaccactc
aagattgaggacgtgattccaaatgatgctcttcgcgaggagattcaggcctggaagcag
aatcgcctcgcccaaaagatggcggagcgcaatgccggcgcagctgcatcagcaagtgaa
gctatggatacttcgtag
DBGET
integrated database retrieval system
