Bipolaris sorokiniana: COCSADRAFT_80011
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Entry
COCSADRAFT_80011 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K11763
chromatin structure-remodeling complex subunit RSC9
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_80011
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_80011
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
COCSADRAFT_80011
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
COCSADRAFT_80011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
GARP
Motif
Other DBs
NCBI-GeneID:
19140760
NCBI-ProteinID:
XP_007695811
JGI:
Cocsa1_80011
UniProt:
M2T0R2
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MAPNKTEETSVEPTQEREDFLDTLAEYHEKRGTVLDREPKIGNRHIDLLRLYKRVNEEGG
YDKVSDTKNNKLAWRRIASEFLPKSPSITTQAFLVKTVYYKNLAAYEISTVHKREPPPPE
ILENVSAKGGDLLNRTVENFHPPSSREAERLRGEEESDEEDDMEKTPKEDKMEVDDSANL
GRSTRSLRHAPPQRVLFQPEASTRQTRQSTGHLNSSQANGYGTSGAAMTIANYEPRTAVP
ATMKPVVTPSNSLDTYVQSRKKYILNKKNRPVPLKGMMLPGTGFPGPSIYIRALNALRSK
EPEEEAYALHHLVKISHERGDKYRFDQFPGLAEALIAKVIDVGALFYDVSWDISYLEEEF
SNPQTLNGLSGTPDLLERISSLRTLDIHDSLLPEQTAKSLNMINEAALIIRNMVMLKENA
LFAALVPSIQDMIVIALNLPTHPSVVELQHYALEITEQLTKYWMLDSQSPLYRSLLAQID
TDDRGRIITSLRALARISMNLDVTNKLSKVPTKTLKSICDWLLVEDEDLRIACLDFLYLF
TGFPDNVETLVHEVDIEGVIKQLVRLLQYGAIAYEERRSTPKTTKSSAPPESAPKLSSAI
IDHLVTLDEPERSSQWLKTCFEEDPTGEITQIQLWSAYNAAFSEHMTHNPASFKALMPAK
DFITNVSTTFGGASAQVLTVGGQPKYTIRGIRPRSVPVDPSTKRPYMRCCWHPPSLLNGH
TDGKHSTANVECGEFASGARSMWEHVVSLHLQVPRDQETGQWLLEPKPDIDMKNGDAVSA
SPPSKYFCHWGGCTRFSPSGTESAFEAGQHLKTHLPDTSIKHAIHAKHNRTPSESRPMTS
SSQMRHESLQPQFGQPVGLGGLGMSGRPQTSTSSVSRNGMGREDSSGPHSAPNFRYYNTA
TDETNDAAGLPLSSVLVLRNLARQLNKIPPPTSVTEITLPSSPSHKRAFSASEGSPEAAR
RATTSGKKPRLNDAASEQRRENEEREEQEAKSAGWVPRMFTPLRDQIAFTASHNLTLRNY
IGGLLKAIAEGGG
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaacaaaacagaggaaacctccgtcgagcccacccaagaacgggaagacttt
ctggataccttggccgaataccacgaaaagcgcggtactgtgctggatcgcgagccgaag
atcggtaatcgacacattgaccttttgcggctctacaaacgcgtgaatgaggagggagga
tacgacaaggtttctgataccaagaacaacaagcttgcgtggcgaagaatcgcctcggaa
tttctccccaagagccccagcataacaactcaggcctttctggtcaagactgtttactac
aagaaccttgctgcatacgaaatatccacagtccacaagcgcgaacccccgccgcctgaa
atcctcgagaacgtatcggctaagggtggggacctgctgaaccgtaccgtagagaacttc
cacccgcctagtagtcgagaagccgaacggctaaggggagaggaggaatcagacgaagaa
gacgacatggagaaaacacccaaagaagacaagatggaggtcgacgattccgccaacctt
gggcggtcgacgcgctccctccgtcatgcgccgccccagcgagtgctgttccagcctgaa
gcctcgactcgccagactcgccaatccacgggccacctgaactcgtcgcaagccaacgga
tatggaacaagcggggccgccatgacaattgcgaactatgagccacgaacagctgtgcca
gccaccatgaaacccgtcgtaactccctcaaactccctcgatacatacgtacaatcgcgc
aagaagtacatcctcaacaagaaaaacaggccagttccactcaaaggcatgatgctgccc
ggtaccggctttcctgggcccagcatttacattcgcgctctcaatgcgctacggtcaaag
gagcccgaggaggaggcatatgctcttcaccatctggtcaagatctcccatgagcgaggc
gacaagtaccgcttcgatcaattcccgggacttgcagaagcactaatagccaaagtcatc
gatgttggcgcgctcttctacgatgtgagctgggacatttcttaccttgaagaggaattc
agcaacccgcagaccttgaatggattgtctggcacccccgacctgcttgagcgcatttct
tctctccgcacgctcgacatccatgacagtctcctacctgaacagacggcaaagtcgctc
aacatgatcaatgaggcagcactgattatccggaacatggttatgctgaaagaaaatgca
ttgtttgccgccctcgtaccgtccattcaagatatgatcgtcattgccctcaatctaccc
acccatccatctgtagtagagctgcagcattacgcccttgaaattaccgagcagttgacg
aagtactggatgctggactctcagagcccgctctaccgttctctgctagcgcaaatcgac
acggatgaccgtggtcggatcattacctctttgagagcgcttgcacgaatatctatgaac
cttgatgttacaaacaagctctcgaaagtaccgacaaagactttaaagtcaatatgcgac
tggctgttagtagaagacgaagatctccgcatagcttgcctagacttcctctacctgttc
actggtttcccagataatgttgagacacttgtacacgaagtcgatattgaaggtgttatc
aagcaattggtgcgactactgcagtatggtgcgattgcttatgaggaacgtaggagcacc
ccaaagactacgaaatcatctgcgccaccagaaagtgcgccaaagctatcgtccgctatt
atcgatcatctagtcactcttgatgaaccagagagaagctcacaatggctcaagacgtgt
tttgaagaagatcccacaggcgaaatcacacagattcaactttggtcagcatacaacgca
gccttctcagagcacatgacacataacccggcttcttttaaggctctcatgcctgcaaag
gatttcatcacaaacgtgtcaactacgtttggtggtgcatctgctcaagttttgactgta
ggtgggcaaccaaagtataccataagaggcatacgaccgcgttctgtaccagtcgatccg
agcaccaagcggccatatatgcgctgctgctggcatccaccgagcttgttgaacggccat
acggatggcaaacactccacggctaatgtcgaatgtggtgagtttgcatccggcgcgaga
tctatgtgggaacacgtcgttagtttgcatctccaagtgcctcgtgatcaggagacaggt
cagtggctgcttgagcccaagccggacattgacatgaaaaacggagacgcggtttcggca
agtccaccttccaaatacttttgtcactggggtggctgtacgcgcttctctcctagtggc
acagaatctgcgtttgaagctgggcagcatctgaagacgcatctgccagacacaagcatc
aagcatgctattcatgcaaagcacaatcggacaccatcagaatctcggcccatgacttct
tcctcacagatgcgacacgaaagcctccagccgcaattcggacagcccgtgggattgggc
ggtttaggcatgagcggtcgaccccagacttcaaccagctccgtcagcagaaacggcatg
ggcagggaggattcgtcaggcccacactcagctccaaacttccggtattacaacactgcc
accgacgaaaccaacgatgccgctggccttcctctatcctctgtgctcgtcctccgcaat
ctcgctcgtcagctcaacaagatcccgccgccaacctccgtcaccgaaatcacattaccc
tcatctccaagccacaagcgcgcattcagtgctagtgaaggcagtcctgaagctgcgaga
cgagctacgacgagcggtaagaagccgcgtctcaacgatgcagcgtccgagcaaagacgc
gagaacgaagagagggaagagcaagaagcgaagagtgcaggatgggtcccgcgcatgttt
accccgttgagagaccagattgctttcacggctagtcataatcttacgttgaggaattac
attggtggactgctgaaggctattgctgagggtggaggttga
DBGET
integrated database retrieval system
