Bipolaris sorokiniana: COCSADRAFT_80486
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Entry
COCSADRAFT_80486 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSADRAFT_80486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_80486
Enzymes [BR:
bsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
COCSADRAFT_80486
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
Other 90S particles
COCSADRAFT_80486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
19140792
NCBI-ProteinID:
XP_007696342
JGI:
Cocsa1_80486
UniProt:
M2T300
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAPAKIGSPKSPVDRPSSRGSPDRAKKRARTQSMPPPELPRLVAEQHAPIPTNDKDTQRL
IVVLCSATLETYKASHGNGRGPGAREDKYNLLNSDDHIGVMRKMGRDISEARPDITHQCL
LTLLDSPINKAGRLQIYIHTSKNVLIRVSPTVRIPRTFKRFAGLMVQLLHRHQIRSTTSQ
EKLIEVIKNPITDHLPPNCRKVTLSFDSEVVRVSDYIGSLNKGESIAVFVGAMAKGNDDF
ADDIKDDSIAISQFNLSASVACSKFCHAAEDVWNIF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcgaagattggaagccccaaatcgccagtcgacagaccttcctcgcgtggc
tcacccgaccgggcaaagaagcgcgcaagaacacagtcgatgcctcctccagagctgccg
agactggtggcagagcaacatgctcctatccccaccaacgacaaggacacacaacggctg
attgtcgtgctctgcagcgccacactcgagacgtacaaggcgtcacatggaaatggccga
ggacccggtgcgcgcgaggataaatacaacctgctcaacagtgacgaccacattggcgta
atgcggaaaatggggcgcgacatcagcgaggctcgaccagacattacacaccaatgtctc
ctcaccctacttgactcgccaatcaacaaggcgggcaggcttcagatctacatccacacg
tccaagaacgtactcatccgggtcagccctaccgtgcgcattccgcgtacgtttaagcga
tttgctggtctcatggtgcagctgcttcacagacatcagatccggtcaaccacatcgcaa
gagaagctcattgaggtgatcaagaaccccatcacagaccacttaccaccaaactgccga
aaggtaacgctcagctttgactcggaggttgtgcgagtgagcgactacattggaagcctc
aacaagggcgagagcattgccgtgtttgttggtgccatggccaagggcaacgacgacttt
gccgacgacatcaaggacgacagcatcgcgattagtcagttcaacctcagtgccagcgtt
gcgtgcagtaagttctgccatgcggccgaggacgtgtggaatatcttctag
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