Bipolaris sorokiniana: COCSADRAFT_82109
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Entry
COCSADRAFT_82109 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSADRAFT_82109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsc03019
]
COCSADRAFT_82109
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_82109
03036 Chromosome and associated proteins [BR:
bsc03036
]
COCSADRAFT_82109
Enzymes [BR:
bsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
COCSADRAFT_82109
Messenger RNA biogenesis [BR:
bsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
COCSADRAFT_82109
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
90S particles
RNase
COCSADRAFT_82109
Prokaryotic type
rRNA processing factors
COCSADRAFT_82109
Chromosome and associated proteins [BR:
bsc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
COCSADRAFT_82109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
DUF5759
Motif
Other DBs
NCBI-GeneID:
19140875
NCBI-ProteinID:
XP_007697228
JGI:
Cocsa1_82109
UniProt:
M2RLX9
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MASHKRGGGFNHYSRDHHSKKHNPPLQRNAPQPELSSASMQTGLVALLDRFVAEETTPGA
DKEILYHANELRRRLCARDHGTSSQAKRELDAKRPDKAVQVAVPDYVHRKVQESKDLPPL
PPIAEPHLHEAVFTHRSAIYDPSIPGSSLGGDLSLDYERLELLGDAYIELIASRALYNRF
PHVDVPELCMWRERLVENSTLGKFSEAYGFPDRLKHRAQWDKNSKQYHKVVADMVEAYVA
AVVLSDPTHGFEAAEAWLTELWAPQLLGFREKIIENPQARDQLNKLVLGKGVKLITKEEK
PMTYDSNSVQCYHMGIYLTGWGYNDEWLGSGEGQNKVQAGVAAAADALKRDSPVLKDAIR
QKDELRAARLKEQEEKAKINQGTDTPAVNSGGGGESGAKEKIDDDNNASSKKRKKEDESA
SPEQKKHRKEKKKKKETYSKILERE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcacaaacgtggaggaggtttcaatcattatagccgcgatcaccacagcaag
aagcacaacccacctctccagcgcaatgcaccgcaaccagaactctcctcggcgagtatg
caaacgggcctggtagctttgttggacaggttcgtcgccgaagagaccactcctggagca
gacaaggaaattctctaccacgcaaatgagctgcgacgccggctttgcgctcgcgaccac
ggcacttcatcgcaagcgaaacgcgaactcgacgcaaagcgacccgacaaggccgtccag
gtcgcggttcccgattacgtacatcgcaaagtccaagaatctaaagatttgccccctctg
ccccccatcgccgagccccatctccacgaagccgtcttcacccatcgatccgctatctac
gaccccagtatccccggctcttcgctgggcggagacctcagcctagactacgaacgtctt
gagctgctcggcgacgcctacatcgaactcattgcctcacgcgcgctctacaaccgcttc
ccacacgtcgatgttccggagctgtgcatgtggcgcgaacgtctggtcgagaactcgaca
ttgggcaaattctccgaggcgtacggttttccggatcgactgaagcaccgggcccaatgg
gacaagaactcgaagcaataccacaaagtcgtcgccgacatggtcgaggcctacgtcgca
gcagtcgttctttctgacccaacgcacggtttcgaggcggctgaggcatggctcacagaa
ctttgggcgccacagctgctcggcttcagggagaagattatcgagaaccctcaagcgcgc
gaccaactcaacaagctggtcctcgggaagggtgtcaagctcatcacaaaggaggagaaa
cccatgacgtacgactccaacagtgttcaatgctaccatatgggtatctatctcacaggg
tggggttacaacgacgagtggctcggcagtggcgaaggtcaaaacaaagtccaggctggc
gttgcagctgcagccgacgccctcaagcgagacagccccgtgctaaaggacgctatacga
cagaaggacgagctgagggcggcgcggctcaaagagcaagaagaaaaggccaagatcaat
caaggtacagatactccagctgtaaatagtggcggcggtggcgagtctggtgccaaggag
aagatagacgacgacaacaatgcctcaagtaagaagcggaaaaaggaagacgaatccgct
tcacctgagcagaagaagcacagaaaggaaaaaaagaagaaaaaggagacatattccaag
attctcgagcgagaataa
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