Bipolaris sorokiniana: COCSADRAFT_87158
Help
Entry
COCSADRAFT_87158 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
bsc
Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsc03009
]
COCSADRAFT_87158
Ribosome biogenesis [BR:
bsc03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
COCSADRAFT_87158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_Nup120_160
PQQ_2
Gryzun-like
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_WDR35_2nd
Nbas_N
Cep57_CLD_2
Motif
Other DBs
NCBI-GeneID:
19141166
NCBI-ProteinID:
XP_007698762
JGI:
Cocsa1_87158
UniProt:
M2RFZ9
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MLTEQFVAAISASTKPNTGILKDAGIFVHEFQPLAAQRQVLKKSATAPNGIAVSATHVFA
AQSEKAVVHVYNREKGNQEALVPFPERIHSIALAAHDSVLLAGTESGRVMAWEISSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHIWALPSILSFSPDASRFPVHTLSTHRGP
ISSIACGHSSSSANIAVSISGDKSAIVWDYQNGQALCTYLLPEIPTAVTLDPADRAFFVA
YSDGSLQTIDFYDEVQKATSVNVLRDSALSHRPIQPSPKTRFSANSQKLGGALSLSLSWD
STTLISGHASGKIASWDVAKSNYLSTPANLPGPVSNLQFLGPTGFPNAHEPTFTIQAIVK
PKQDAGLASSVNGLVPPHYTLSMQLAGRLRSSHLSASEQGSAGKSEFEEALTHPSFPTSM
FEESLTELNSWGTQARASVAPAADFMALDTDDAGASGTTGNAQQAEVKELKKQLASLQRI
QKVTFSQLSELREENDYFMAQEKKRAERAKIRAKKKTNGTKHSLDTADVEMNDGTDGTSE
SGLSDARADEKS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgaacaattcgtggccgctatatcggcttcgaccaagccgaatactggaatc
ctcaaagatgcgggtatttttgttcacgagttccagccgctggctgctcaacgacaggtc
ttgaagaagagtgcgactgcgcccaatggcattgctgtgagcgccacacacgttttcgct
gcacagtcggaaaaggcagtcgtgcatgtgtacaatagggaaaaaggcaaccaggaagcc
cttgtgccctttccagagagaatccatagcattgcgttggcagcacatgatagcgtgctg
ttggctgggacagaaagtgggcgagtaatggcttgggagatcagctcaggccgcctcgtc
tctacctctacttcgcatctccagccagtgacgtgcattgtcgttgatccgtcctccaac
ttctttctctctggctcctcagatgctatgattcacatatgggccctgccctcgatactc
tccttctcgcctgatgcctcgcgcttccccgtacataccctctctacccaccgcggtccc
atctcttctattgcctgcgggcacagttcaagcagcgccaacattgccgtatctatatcg
ggtgacaagtctgctattgtgtgggactatcaaaatggacaggcgctgtgcacatacttg
ttaccggagatacccactgccgtcactcttgatcctgccgatcgcgcattctttgttgcg
tactccgacggtagtttgcagacaatcgatttctacgacgaggtgcaaaaggctacatcg
gtaaatgtcctccgtgacagtgctttgtctcaccgccctatccagccctcgcccaagacg
cgattcagtgccaattcgcagaagctcggtggagccctcagcctgagtttgagttgggat
agtacaacgctcatctctggtcatgcaagtggcaaaattgcttcttgggatgtcgccaag
tcaaactatctttcaactccggccaatcttccagggcctgtctcaaatttacagttcctc
ggccccacaggctttcccaacgcacatgaaccaacgttcaccatccaggccattgtcaaa
ccaaaacaagacgctggacttgcaagtagcgtgaatggcttagtgccaccacattatacc
ctgagtatgcagctggcgggtcggctacgcagctctcacttgtctgccagtgagcaagga
agtgcagggaaaagcgagtttgaagaggccctcacccatcctagttttcctactagcatg
tttgaggagagtctaaccgagctgaactcttggggcactcaggccagggccagtgtcgct
ccggcagccgacttcatggccctggacacagatgatgcaggtgcctccggaactacaggc
aatgcccagcaagctgaagtcaaagagctcaagaaacagcttgcaagcctccagcgtatc
cagaaagtaaccttttcgcagctttcggagctgcgtgaggaaaatgactacttcatggcc
caagaaaagaagcgggcagaacgtgccaagatacgagcaaagaagaagaccaatggcaca
aagcatagtcttgatactgcggatgtggaaatgaatgacggcaccgacggcacttccgaa
tcagggctaagtgatgctcgggcagacgaaaagtcttga
DBGET
integrated database retrieval system