KEGG   Bipolaris sorokiniana: COCSADRAFT_87158
Entry
COCSADRAFT_87158  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
bsc  Bipolaris sorokiniana
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bsc03009]
    COCSADRAFT_87158
Ribosome biogenesis [BR:bsc03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    COCSADRAFT_87158
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_IP5PC_F NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_Nup120_160 PQQ_2 Gryzun-like Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR35_2nd Nbas_N Cep57_CLD_2
Other DBs
NCBI-GeneID: 19141166
NCBI-ProteinID: XP_007698762
JGI: Cocsa1_87158
UniProt: M2RFZ9
LinkDB
Position
Unknown
AA seq 552 aa
MLTEQFVAAISASTKPNTGILKDAGIFVHEFQPLAAQRQVLKKSATAPNGIAVSATHVFA
AQSEKAVVHVYNREKGNQEALVPFPERIHSIALAAHDSVLLAGTESGRVMAWEISSGRLV
STSTSHLQPVTCIVVDPSSNFFLSGSSDAMIHIWALPSILSFSPDASRFPVHTLSTHRGP
ISSIACGHSSSSANIAVSISGDKSAIVWDYQNGQALCTYLLPEIPTAVTLDPADRAFFVA
YSDGSLQTIDFYDEVQKATSVNVLRDSALSHRPIQPSPKTRFSANSQKLGGALSLSLSWD
STTLISGHASGKIASWDVAKSNYLSTPANLPGPVSNLQFLGPTGFPNAHEPTFTIQAIVK
PKQDAGLASSVNGLVPPHYTLSMQLAGRLRSSHLSASEQGSAGKSEFEEALTHPSFPTSM
FEESLTELNSWGTQARASVAPAADFMALDTDDAGASGTTGNAQQAEVKELKKQLASLQRI
QKVTFSQLSELREENDYFMAQEKKRAERAKIRAKKKTNGTKHSLDTADVEMNDGTDGTSE
SGLSDARADEKS
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgctcaccgaacaattcgtggccgctatatcggcttcgaccaagccgaatactggaatc
ctcaaagatgcgggtatttttgttcacgagttccagccgctggctgctcaacgacaggtc
ttgaagaagagtgcgactgcgcccaatggcattgctgtgagcgccacacacgttttcgct
gcacagtcggaaaaggcagtcgtgcatgtgtacaatagggaaaaaggcaaccaggaagcc
cttgtgccctttccagagagaatccatagcattgcgttggcagcacatgatagcgtgctg
ttggctgggacagaaagtgggcgagtaatggcttgggagatcagctcaggccgcctcgtc
tctacctctacttcgcatctccagccagtgacgtgcattgtcgttgatccgtcctccaac
ttctttctctctggctcctcagatgctatgattcacatatgggccctgccctcgatactc
tccttctcgcctgatgcctcgcgcttccccgtacataccctctctacccaccgcggtccc
atctcttctattgcctgcgggcacagttcaagcagcgccaacattgccgtatctatatcg
ggtgacaagtctgctattgtgtgggactatcaaaatggacaggcgctgtgcacatacttg
ttaccggagatacccactgccgtcactcttgatcctgccgatcgcgcattctttgttgcg
tactccgacggtagtttgcagacaatcgatttctacgacgaggtgcaaaaggctacatcg
gtaaatgtcctccgtgacagtgctttgtctcaccgccctatccagccctcgcccaagacg
cgattcagtgccaattcgcagaagctcggtggagccctcagcctgagtttgagttgggat
agtacaacgctcatctctggtcatgcaagtggcaaaattgcttcttgggatgtcgccaag
tcaaactatctttcaactccggccaatcttccagggcctgtctcaaatttacagttcctc
ggccccacaggctttcccaacgcacatgaaccaacgttcaccatccaggccattgtcaaa
ccaaaacaagacgctggacttgcaagtagcgtgaatggcttagtgccaccacattatacc
ctgagtatgcagctggcgggtcggctacgcagctctcacttgtctgccagtgagcaagga
agtgcagggaaaagcgagtttgaagaggccctcacccatcctagttttcctactagcatg
tttgaggagagtctaaccgagctgaactcttggggcactcaggccagggccagtgtcgct
ccggcagccgacttcatggccctggacacagatgatgcaggtgcctccggaactacaggc
aatgcccagcaagctgaagtcaaagagctcaagaaacagcttgcaagcctccagcgtatc
cagaaagtaaccttttcgcagctttcggagctgcgtgaggaaaatgactacttcatggcc
caagaaaagaagcgggcagaacgtgccaagatacgagcaaagaagaagaccaatggcaca
aagcatagtcttgatactgcggatgtggaaatgaatgacggcaccgacggcacttccgaa
tcagggctaagtgatgctcgggcagacgaaaagtcttga

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