KEGG   Bipolaris sorokiniana: COCSADRAFT_88462
Entry
COCSADRAFT_88462  CDS       T03124                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
bsc  Bipolaris sorokiniana
Pathway
bsc03040  Spliceosome
bsc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bsc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    COCSADRAFT_88462
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    COCSADRAFT_88462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bsc03041]
    COCSADRAFT_88462
   04121 Ubiquitin system [BR:bsc04121]
    COCSADRAFT_88462
   03400 DNA repair and recombination proteins [BR:bsc03400]
    COCSADRAFT_88462
Enzymes [BR:bsc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     COCSADRAFT_88462
Spliceosome [BR:bsc03041]
 Complex B
  Other components
   Prp19 complex
    COCSADRAFT_88462
 Complex C
   Prp19-CDC5 complex
    COCSADRAFT_88462
Ubiquitin system [BR:bsc04121]
 Ubiquitin ligases (E3)
  U-box type E3
   COCSADRAFT_88462
DNA repair and recombination proteins [BR:bsc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    COCSADRAFT_88462
SSDB
Motif
Pfam: WD40_Prp19 Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR19_1st WDR55 EIF3I Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML WD40_like eIF2A Beta-prop_IFT122_1st Beta-prop_HPS5 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st PEP5_VPS11_N B-prop_COPA_B_2nd U-box Beta-prop_NUP159_NUP214 NBCH_WD40 KNTC1_N Beta-prop_IFT122_2nd Beta-prop_WDR35_TULP_N DUF3450 zf-Nse V_ATPase_I_N PQQ DUF5711
Other DBs
NCBI-GeneID: 19141247
NCBI-ProteinID: XP_007699438
JGI: Cocsa1_88462
UniProt: M2T6M0
LinkDB
Position
Unknown
AA seq 471 aa
MLCAISGEAPREPVASRKSGNVFEKRLIEAHIAEHHTDPVTGEDLATEDLIELKSPNVVT
PRAPNFTSIPAMLSAFQNEWDALVLETHTLKQHLAQTRQELSTALYQNDAATRVIARITK
ERDEAREALSNVTISGGAQGDAMQVDNQGLPQDLIEVVDDTQQELFGSRRKRAVPAGWAT
GEVITNYDLVKTTEAIYPGSSNIAVQEDGLVLFGGSDGTAGIYALAEGRVTQTFNAGSAI
TAAAWCGGRAVVGTSAGVAKIFEQGNEVAQVGSHAGAITSISVHPSGKMLATAGADKHYA
VHELTSFKTVSQVYIEAEITCVAFHVDGMLFFVGSSDGNIRIYDIKTGVAMAQLETGAPI
VDLKFAENGTWFAVAQQGSTTVSVWDIRKQTVIYTLESGSLVTCCEWDYSGMYLAIGGTG
SVSVQQFTKATKSWAELVRKALPVKDVAWSGKAESVVALTPEGGLAVLAAP
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgctctgtgcaatctctggagaagctccccgcgagcctgttgcctcgcgcaagtcgggc
aacgtcttcgagaagcgtctgattgaagcgcacatcgcagaacaccacaccgacccggtt
acgggagaagacctggcgactgaggacctcatcgagctcaagtcgcccaatgtcgtgacc
ccacgcgcgcccaacttcacctcaatacctgccatgctcagtgccttccaaaacgaatgg
gacgccctggtactagagacacatacgctcaagcagcacctggcgcaaacgagacaagag
ctgagtaccgccctgtaccagaacgacgccgctacacgggtaattgcacgtataacaaaa
gagcgagatgaggcgcgcgaggccctgtcaaatgtcaccatcagcgggggcgcccagggt
gatgctatgcaagtcgataaccagggcctgcctcaggatctgatcgaggtggttgacgac
acacagcaagaattgttcggttcgcgccgaaaacgagctgtaccagcaggctgggctact
ggtgaagtcatcaccaactacgacctggtcaagacaacagaggctatatacccaggtagc
agcaacattgccgtacaagaagacggtctggtcttgtttggtggatcagacgggacagct
ggcatctatgcgctggccgagggcagggttacacagaccttcaacgctggtagcgccatc
acagcagcagcttggtgtggaggccgcgcagttgttggaacatcggctggtgtcgccaag
attttcgagcagggtaacgaggttgctcaagtgggatcgcatgctggagctattacgtcc
atttctgttcaccccagtggaaagatgctcgcaacagcgggtgcggacaagcactatgct
gttcacgagcttacttcgttcaagaccgtgtctcaggtttacatcgaagcggaaatcacc
tgtgttgccttccacgttgatggtatgctcttctttgtcggcagctccgatggcaacatc
cgcatttacgacattaagaccggtgttgctatggcccaattagaaacaggtgctcctatt
gtggacctcaagtttgctgaaaacggtacttggttcgctgttgcccagcaaggttctacc
accgtctctgtctgggatatccggaagcaaacggtcatttacacactcgagtctggaagc
ctggtcacgtgctgtgaatgggactacagcggcatgtatctggcgattggtggcactggt
agcgtgtcggtgcagcagttcacaaaggcaaccaagagctgggccgaacttgtgaggaag
gcactaccagtcaaggacgttgcatggagtggaaaggctgagagtgtggtggctctgaca
ccagagggtggtttggcggtattggctgccccttaa

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