Bipolaris sorokiniana: COCSADRAFT_97372
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Entry
COCSADRAFT_97372 CDS
T03124
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bsc
Bipolaris sorokiniana
Pathway
bsc03022
Basal transcription factors
bsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCSADRAFT_97372
09124 Replication and repair
03420 Nucleotide excision repair
COCSADRAFT_97372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsc03021
]
COCSADRAFT_97372
03400 DNA repair and recombination proteins [BR:
bsc03400
]
COCSADRAFT_97372
Transcription machinery [BR:
bsc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
COCSADRAFT_97372
DNA repair and recombination proteins [BR:
bsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
COCSADRAFT_97372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
19141731
NCBI-ProteinID:
XP_007703467
JGI:
Cocsa1_97372
UniProt:
M2SFF3
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSASSSAQALEYLEGLPLATHKKLYEQPSTVLAVFRCMLPHLAKSIVMAMLYMPTPFPAA
DLDTWFKPTARKEKERATFTLDRLHIITSARQDNGTLSWTLNPGFQRSLRNAIEGSGTHR
SFGVPATKEESGKRVSIEFLDEYSRSQWEGILYYLVSGAAGLSKDSISRAEVGPGTKKLL
HTGDLVRTIHGSPRITKDGFSFVLQETNAQVWSLLIVYLKMTNELGMSETEVLSFLFMLG
SLELGQDYSTSTLSATQLQMLEDLSAMGLVYRSERNARTFYPTRLATTLTSDSGSAMSAS
SKDIAQASTSTTGPPTAANKGFIIIETNYRLYAYTNSLIQIAILSLFTKLQHRFPNLVSG
KLTKESVHKAVQAGITSAQIISYLTTYAHPQMQKTVPYIPPTVMDQIRLWEYEGERVETT
TGYLMREFGSDAEYRDVLNYASALGVLVWQNDANRCFFVSHVEQISAYLRKKKENRENAR
GR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcgtcttctgctcaggcgctggaataccttgagggtctcccgctggccaca
cacaagaagctgtatgagcagccttcaacagttctggcggtattccgctgcatgttaccg
catcttgccaagtcaatagtcatggctatgctctacatgcccactcccttccccgctgcc
gatctcgatacctggttcaaacccactgcgcgcaaagagaaagagcgggcaacctttacc
ctcgatcgtctgcatatcattacctcggcgcgacaggacaacggcactctatcgtggacg
ctcaatccaggcttccaacgcagcctccgaaacgccatcgagggctctggcacccatcgc
tcttttggagtaccggcgacaaaagaagagagtggaaagcgcgtcagtattgaattcttg
gacgagtattcgaggtcacaatgggagggcatattgtactaccttgtaagcggtgcggct
ggtcttagcaaagacagcatctctagagcagaggttggtcctggcaccaagaagctatta
catactggcgatctagtgcgcacgatacatggtagtccaagaatcacaaaagatggcttc
tctttcgtgctacaagagacgaatgcgcaggtttggagtctgctgattgtctatttgaag
atgacgaacgagctcgggatgtctgaaaccgaagttctctcattccttttcatgcttggc
tctcttgaattgggccaagattactcgacttccaccctctcggcgacccaactccaaatg
ctcgaggacctctctgcaatgggtcttgtatatcgctctgaaaggaatgcgcgaaccttt
taccccactcggttagctacaacgctcacatcagactctggtagtgccatgtcagcctcc
tccaaggatattgcacaagcaagcacaagcaccactggacctccaaccgcagcaaacaag
ggcttcataatcatcgagaccaactaccgactctacgcctacactaacagtctgatccaa
atcgccattctctctctcttcactaaactccaacatcgcttccccaacctcgtctcggga
aaactaacaaaggagtccgtgcacaaagccgtccaggcaggcattacctcagcacaaatt
atttcctacctaaccacctatgcccacccgcagatgcaaaaaactgtcccctacatcccg
ccaactgtcatggatcaaatccgtctctgggaatacgaaggcgagcgcgtggaaacgaca
acgggctacttgatgcgcgagtttggttcggatgcagaatatagagacgttttgaactat
gctagtgcgctgggagtgctggtctggcagaatgatgctaacaggtgcttttttgtcagc
catgtcgaacagatcagtgcgtatttgaggaagaagaaggagaacagagagaatgctagg
ggccgataa
DBGET
integrated database retrieval system
