Bifidobacterium scardovii: BBSC_0133
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Entry
BBSC_0133 CDS
T03975
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBSC_0133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_0133
Enzymes [BR:
bsca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
BBSC_0133
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBSC_0133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAQ30213
LinkDB
All DBs
Position
complement(156436..157065)
Genome browser
AA seq
209 aa
AA seq
DB search
MSDIRHSPLEGRRPKRTELAGFVDGTVDDIRCPHPKLLIVGINPGLWTAAVNAPFAYPGN
RFWPSLFASGLTPWQVDASYGLHLRDERMMIDRGIGLTNLVNRATAKASELNTAELRQGA
DRLRELCARIHPRVIAILGITAYRQAFADKSASLGLQDLTAEETDRFGGAQLWVIPQPSG
LNAHATMPVLVDWWRRVADAAGLDLAAAR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatattcgacattctccgctggaaggccgtcgtccgaaacgcaccgagctcgcc
ggtttcgtcgacggcacggtcgacgacatccgctgcccgcaccccaaactgcttatcgtg
ggcatcaaccccgggttatggacggccgcggtcaacgcgcccttcgcctatcccggcaac
cgattctggccgtcgctcttcgcctcggggctcacgccgtggcaggtggacgccagttac
ggcctgcatcttcgcgatgagcgcatgatgatcgaccgcggcatcgggcttaccaatctc
gtcaatcgcgccaccgcgaaagcgagcgagctgaacaccgccgagctgcgccaaggcgcc
gatcggctgcgggagctgtgcgcgaggatccatccccgggtcattgcgatactgggcatc
acggcgtaccggcaggcgttcgccgacaagtccgcctcgctgggactgcaggacctcacc
gcggaagagaccgaccggttcggaggcgcgcagctgtgggtgattccccagcccagcggg
ttgaacgcgcacgccaccatgccggtgctggtcgactggtggcgcagggtcgccgacgca
gccggtctggatctcgccgccgcgcgctag
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