Bifidobacterium scardovii: BBSC_0341
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Entry
BBSC_0341 CDS
T03975
Name
(GenBank) truncated diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00300
Lysine biosynthesis
bsca00470
D-Amino acid metabolism
bsca01100
Metabolic pathways
bsca01110
Biosynthesis of secondary metabolites
bsca01120
Microbial metabolism in diverse environments
bsca01230
Biosynthesis of amino acids
Module
bsca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBSC_0341
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBSC_0341
Enzymes [BR:
bsca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBSC_0341
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAQ30421
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All DBs
Position
427536..429206
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AA seq
556 aa
AA seq
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MAITPIWPEATGIDENGELTFHGRTAASLLDEFGSPLYVIDTDEVAGRARHFVRAAAEAF
SNSTTHVSFAGKAFLSKEIVRIVTGAGMLVDTCSMGEIRIALAAGVPGRRLVLHGNNKSD
EEIALAIEQGFAKIVVDSPDEPARIAAIAQRLGKRARVMLRVTSGIHAGGHEYVSTAHED
QKFGVPLLPAGADAAVLDVLADLAGVTPAGANARVAAAGVGAVAAASAVAVAAAGAASDD
AAAESSGAAANLHEGRELHHNVRYPYDLDRSEVSETDRALAAAMEAVADGPALAVLKDIY
ARQDVLELVGVHSHIGSNIHDADAFIQAARRMMLLRKTFYATDAYTLPEVDLGGGYSVAY
TDGEDSMDIDVELRRLADAVTGINRALGMPAPAISFEPGRWIVAPAGVTLYRVGTIKPVH
LSGGDHAATDKTGNPISERVYVSVDGGMSDNIRPALYGADYTVRLANRHGSDGTMLVRVV
GMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHV
MLRRQTIDDLLDLDLG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccattacccccatctggcccgaagccacgggcatcgacgagaacggcgagctcacc
ttccacgggcgcacggcggcgtcgctgctcgacgagttcggttcgccgctgtatgtgatc
gacaccgacgaggtggcggggcgcgcccgtcatttcgtgcgggcggcggccgaggcgttc
agcaattcgaccacgcatgtgagtttcgcgggcaaggcgttcctgtccaaggaaatcgtg
cggatcgtcaccggcgccggcatgctggtcgacacctgctcgatgggggagatccgcatc
gcgctggcggccggcgttcccgggcgccgtctcgtactgcacggcaacaacaagtccgac
gaggagatcgcgctggcgatcgagcagggcttcgccaagatcgtggtcgattctcccgac
gagccggcgcgcatcgccgcgatcgcgcagcggctcggcaagcgcgccagggtgatgctg
cgcgtgacctccggcatccacgcgggcgggcacgagtacgtttccaccgcgcatgaggat
cagaagttcggcgtgccgctgctgccggccggcgccgatgccgcggtgctggacgtgctc
gccgatttggccggcgtgacccctgccggggcgaatgcgcgcgtggccgctgccggtgtc
ggtgcggtggctgcggcgtctgcggttgcggtggctgcggcgggtgcggcctcggatgat
gcggctgcggagtcgtccggcgccgcggcgaatctgcatgaggggcgcgaactgcaccac
aatgtgcgttatccctacgatctcgaccgctccgaggtctccgaaaccgaccgcgcgctc
gccgcggcgatggaggctgtggcggacggtccggcgctcgccgtgctcaaggacatctac
gcgcgccaggacgtgctcgaactcgtcggcgtccactcgcatatcggatcgaacatccat
gatgcggatgcattcatccaagccgcccgccgcatgatgctgctgcgcaagaccttctac
gcgaccgacgcctacacgctgcccgaggtcgatcttggcggaggatattccgtggcgtac
acggacggcgaggattcgatggacatcgacgtcgagctgcgccgcctggccgatgcggtc
accggcatcaaccgcgccctcggcatgcctgcgccggcgatctccttcgaaccggggcgc
tggatcgtggctccggccggcgtgacgctgtaccgcgtcggcacgatcaagcccgtgcac
ctgagcggcggcgaccatgccgcgaccgacaagaccggcaacccgatcagcgagcgcgtc
tatgtgtccgtcgacggcggcatgagcgacaacatccgcccggcgctctatggcgcggat
tacacggtgcgcctcgccaaccgccatggcagcgacggcacgatgctggtgcgcgtggtc
ggcatgcactgcgagtccggcgacatcatcgtgcatgaggaccggctgcccgccgatctt
cgacgcggcgacatcctggccgtgccggtgaccggcgcctatgggcgcacgatggcgagc
aactacaaccaggcgctgatccccgccgtggtggccgtgtccgagtccggcgcgcacgtc
atgctgcggcgccagaccatcgacgacctgctcgatctggatctcggctga
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