Bifidobacterium scardovii: BBSC_0532
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Entry
BBSC_0532 CDS
T03975
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBSC_0532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsca03021
]
BBSC_0532
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_0532
Enzymes [BR:
bsca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBSC_0532
Transcription machinery [BR:
bsca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBSC_0532
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBSC_0532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BAQ30612
LinkDB
All DBs
Position
625557..626552
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEVLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGEGEATAGDITPPAGVTIAN
PELHIASLAEDGELEIEFTVERGRGYVPAQMNKPETAEIGRIPVDSIYSPVLKVSYKVEA
TRVAQRTDFDKLILDVETKAAISPRDAVASAGSTLVELFGLCHELNTQAEGVEVGPAPVA
EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKDK
LQTLGLSLKASPLGFDTNNLEGGTFYSPEDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcttatcgcacagcgtccgacactgaccgaggaagtcctcaaccctcagcgctcccgt
tttaccatcgagcctcttgagcccggtttcggctatacgcttggcaactcgctgcgccgt
accctgctgagctcgatcccgggtgccgctgtgacttcggtgcgtatctccggtgccctg
cacgagttcaccactctgccgggcgtggaggaggacgttaccgagatcctgctcaacatc
aaaggcatcgtgctcaccagcgaatacgatgagccggttgtcatgtatctgcgcaagagc
ggcgaaggcgaagccaccgcgggtgacatcacccctccggccggcgtgaccatcgccaat
cctgaactgcatatcgcaagtctggctgaggatggcgagctcgagatcgagttcaccgtc
gagcgcggccgcggctacgtgcctgcgcagatgaacaagccggagaccgccgagatcggc
cgtatcccggtcgactcgatctactccccggtgctcaaggtgagctacaaggtcgaggcc
acccgtgtggcgcagcgcaccgatttcgacaagctcatcctggatgtggagaccaaggcc
gccatctcgccgcgcgacgccgtcgcgtccgcgggatccacgctggtggagctcttcggc
ctgtgccacgagctcaacacccaggcggaaggcgtcgaggtcggcccggcccccgtggcc
gaggagaccaaccctgaaatggccgttccgatcgaggatctcaacctcacgcagcgcagc
tacaactgcctgaagcgcgagggtatccacacgatcggcgagctggtcgcccacaccgag
caggacctgctcgacatccgcaatttcggtatgaagtcgatcgacgaggtcaaggacaag
ctgcagaccctgggtctgtcgctcaaggcctccccgctgggcttcgacaccaacaacctc
gaaggcggcaccttctactcgccggaagacgagtga
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