Bifidobacterium scardovii: BBSC_0542
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Entry
BBSC_0542 CDS
T03975
Name
(GenBank) putative alpha-L-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00520
Amino sugar and nucleotide sugar metabolism
bsca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
BBSC_0542
Enzymes [BR:
bsca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
BBSC_0542
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Motif
Other DBs
NCBI-ProteinID:
BAQ30622
LinkDB
All DBs
Position
638377..639879
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AA seq
500 aa
AA seq
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MKVTIDAERRIGVRDRMLYGQFLEHFHRQVYGGVFDPGSPLSNGDGLREDVIEAVRRLDV
PILRWPGGCFVSSYHWLDGVGAEREPVFDKMWRVEDPNTFGTDEYVKFCRAIGCEPYICT
NAGTGTQEEMSDWVEYCNLDHEGRYARMRIANGSREPFAVKYWSVGNENWGAWEIGAKTR
DEWGHFVREAAKMIKHVDPTVELSAAALPDVDWNLGLLRQCSDYLDWISIHQYWDAIHET
NNASKFDQVVGMMTDLDGNIVKVRGLLDALGLSDRIRIAFDEWNLREWYHPKAVTIEQGV
TKDEYLTPRDGNDDNSLYTMADAVFSAGFLNVLNRNCRSVGMACFSPLVNTRGCIFVHPK
GIVLRPTYFVFDLYANHLGDVVLDDWCAGGDTVTVADPSGADVTVPALDVLSTTWEDGHA
VALAVSSRDRARAHGLEISLDELAPHGKVTMLTLNGPSEESYNDIGHTDVSIATRDLGAY
HPGMRVDVDPHSVNIIEIQR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacaatcgacgccgaacggcgtatcggcgtgcgcgaccgcatgctgtacggc
cagttcctggagcatttccaccgccaggtctatggcggggtcttcgatcccggatcgccg
ctgtcgaacggcgacgggctgcgcgaagacgtgatcgaggcggtgcgccggctcgacgtg
cccatcctgcgctggccgggaggctgcttcgtctcgtcgtaccactggctcgacggcgtc
ggcgccgagcgcgagccggtgttcgacaagatgtggcgcgtcgaggatcccaataccttc
ggcacggacgagtacgtgaagttctgccgcgccatcggctgcgagccctacatctgcacc
aatgccggcaccggcacgcaggaggagatgagcgattgggtcgagtactgcaaccttgac
cacgaaggccgctatgccaggatgaggatcgccaacggcagcagggaaccgttcgccgtg
aagtactggagcgtcggcaacgagaactggggtgcatgggagatcggggcgaagacccgc
gacgagtgggggcacttcgtgcgcgaggcggccaagatgatcaagcatgtggacccgacg
gtcgagctcagcgcggcggccctgccggacgtcgactggaacctaggattgctgcggcag
tgcagcgactatctggattggatttcgatccaccagtattgggatgcgatccacgagacc
aacaacgcgtcgaaattcgaccaggtggtgggcatgatgacggatctggacgggaacatc
gtcaaggtccgcggtctgctggacgcgctggggctgagcgaccgcatccgcatcgccttc
gacgaatggaacctgcgcgaatggtaccatccgaaggccgtgaccatcgagcagggcgtg
acgaaggacgagtaccttacgccccgcgacggcaacgacgacaacagtctgtacaccatg
gccgacgccgtgttctccgcggggttcctgaacgtgctgaaccgcaactgccgctccgtc
ggcatggcgtgcttctcgccgctggtcaatacgcgggggtgcatcttcgtccacccgaag
ggcatcgtgctgcggccgacctacttcgtcttcgacctgtacgcgaaccatctcggcgac
gtggtgctggacgactggtgcgcgggcggcgacacggtgacggtcgccgatccctcgggc
gccgacgtgacggtgccggcgctggacgtgctgtccacgacctgggaggacgggcatgcc
gtcgcgctggccgtatcgtcccgcgaccgtgcccgtgcgcatggtctggagatctcgctg
gacgagctcgcgccgcacggcaaggtgacgatgctgacgctgaacggcccgtcggaggaa
tcctacaacgacatcggccataccgatgtctccatcgcgacgcgcgatctgggggcgtac
catccgggcatgcgtgtcgatgtcgatccccactcggttaatatcattgagatacaacgg
tag
DBGET
integrated database retrieval system
