Bifidobacterium scardovii: BBSC_0660
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Entry
BBSC_0660 CDS
T03975
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsca03032
]
BBSC_0660
03029 Mitochondrial biogenesis [BR:
bsca03029
]
BBSC_0660
Enzymes [BR:
bsca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBSC_0660
DNA replication proteins [BR:
bsca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BBSC_0660
Mitochondrial biogenesis [BR:
bsca03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BBSC_0660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
Viral_helicase1
AAA_16
DEAD
Herpes_Helicase
NTPase_1
SH3_13
nSTAND3
AAA_5
TrwB_AAD_bind
AAA
AAA_24
SLFN-g3_helicase
AAA_14
MeaB
cobW
IstB_IS21
UvrD_C_2
ABC_tran
Helicase_RecD
Zeta_toxin
AAA_18
KdpD
AAA_7
TsaE
YqeC
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAQ30740
LinkDB
All DBs
Position
783833..785248
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AA seq
471 aa
AA seq
DB search
MRQSEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIASTHVNGQ
TIHSWSGVGVATSLSANLLKLIKTRRRRKIQSTDILVIDEVSMMHAWLFDMVDQVCREVR
RDPRPFGGLQVVLSGDFFQLPPVSVSGRNNDMVSPTPEFLASRERYAKAGRNPEGFVTES
LVWDELDPVICYLTEQHRQDDGQLLTVLTDIREGCVSAEDHDVLAARLGLAPAPGEVAVH
LFPVNRQADGLNDLRLAQIASEEHTFFAEQAGPANLVERLKKNMLAPDKLVLKEGAAVMA
LRNDTDRQYVNGSIGTVRGFAPEAKGGWPIVEFENGNIVTMKQAAWEMMDGETVLASVNQ
VPLRCAWAITIHKSQGMTLDRAVMDLKRTFAPGMGYVALSRVESMNGLYLAGVSERMFFV
SPDAVMLDGTLRSGSAAASDRLAEEGVAAFKPAPEHPESDSGGEFEQAELF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaatccgaagccctggcgattctgaacgccggagccaacgtgttcctcaccggt
gcgcccggtgccggcaagacctacgtgctcaacgagttcatccggcaggcgagggcggac
ggcgcctccgtggccgtcaccgcgtcgaccggcatcgcgtcgacgcatgtgaacggccag
acgatccactcgtggagcggcgtcggcgtggccacgtcgctgagcgcgaacctgctcaag
ctcatcaagaccaggcgccggcgcaagatacagtccaccgacatcctggtcatcgacgag
gtgtcgatgatgcacgcgtggctgttcgacatggtcgatcaggtgtgccgcgaggtgcgc
cgcgacccccgtccgttcggcgggctgcaggtggtgctctccggcgacttcttccagctg
ccgccggtgagcgtgtccggccgcaacaacgacatggtctctccgacgccggaattcctc
gcgtcccgcgagcggtacgcgaaggccgggcgcaatcccgaggggttcgtcaccgaatcg
ctggtgtgggacgaactcgacccggtgatctgctatctgaccgagcagcatcgccaggac
gacggccagctgctcaccgtgctcaccgacatccgcgagggctgcgtgtcggccgaggac
cacgacgtgctcgccgcccgcctcggcctcgccccggctcccggcgaggtggccgtgcat
ctgttcccggtcaaccggcaggccgacgggctcaacgatctgcggctcgcgcagatcgcc
agcgaggagcacaccttcttcgccgagcaggccgggccggcgaatctggtcgaacggctg
aagaagaacatgctcgccccggacaagctcgtgctcaaggagggcgcggcggtcatggcg
ctgcgcaacgacacggaccgccagtacgtcaacgggtcgatcggcacggtgcgcggcttc
gcgcccgaggccaagggcggctggcccatcgtggaattcgagaacggcaacatcgtgacc
atgaagcaggccgcgtgggagatgatggacggcgagaccgtgctggcgtccgtcaaccag
gtgccgctgcgctgcgcatgggcgatcacgatccacaagtcgcagggcatgacgctcgac
cgggccgtcatggacctgaagcgcaccttcgcgcccggcatgggctacgtggcgctgtcc
cgcgtggaaagcatgaacggcctgtatctggccggggtgagcgaacgcatgttcttcgtg
tcccctgacgcggtgatgctcgacggcacgctgcgttccggttcggctgcggcttcggac
cggcttgccgaggagggcgtcgccgcgttcaaaccggcgccggagcatccggaatccgat
tccggcggggaattcgagcaggcggagctgttctga
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