Bifidobacterium scardovii: BBSC_0994
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Entry
BBSC_0994 CDS
T03975
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBSC_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_0994
Enzymes [BR:
bsca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBSC_0994
DNA repair and recombination proteins [BR:
bsca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBSC_0994
Prokaryotic type
BBSC_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAQ31074
LinkDB
All DBs
Position
complement(1181192..1181929)
Genome browser
AA seq
245 aa
AA seq
DB search
MDTTHVKPLSELVEAGWAEALAPVEPDIHRMGDFLRGELAAGRRYLPASRNILRAFTIPF
DSIKVLIVGQDPYPTPGHPVGLSFCVAPDVRPLPKSLINIYKELVSDLGVPVPANGDLTP
WTRQGVMLLNRCLTVGVGRPNSHQGKGWEPITEAAIRALNARVDEQGRPRPLIAILWGRN
AQSLEPLLTNAFIIKSPHPSPLSASRGFFGSKPFSRANAALVAAGVQPVDWSLPAADPAA
QAATM
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggataccactcacgtcaaaccattatccgaactcgtcgaggcgggctgggccgaggcg
ctggcccccgtcgaacccgacatccaccgcatgggcgacttcctgcgcggcgagctggcc
gccggccgccgctatctgccggccagccgcaacatcctgcgggccttcaccatccccttc
gactcgatcaaggtgctcatcgtcgggcaggacccctacccgaccccggggcacccggtc
ggcctgagcttctgcgtggcgcccgacgtccggccgctgccgaaaagcctgatcaacatc
tataaggagctggtcagcgacctcggcgtgccggtgccggccaacggcgacctgaccccg
tggacccggcagggcgtcatgctgctcaacaggtgcctgaccgtgggcgtaggccggccg
aacagccatcagggcaagggctgggagccgatcaccgaggccgcgatacgcgcgctcaac
gcgcgcgtcgacgagcagggccgtcccaggccgctgatcgccattctctgggggcgaaac
gcgcagagcctcgaaccgctgctgaccaacgcattcatcatcaaatctccacatccgagc
ccgctgtccgcctcacgcggcttcttcgggtcgaaaccgttctcccgggccaatgcggcg
ctggtcgccgcgggcgtgcaaccggtggactggtcgctgccggcggccgatccggcagcg
caagccgctaccatgtaa
DBGET
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