Bifidobacterium scardovii: BBSC_1084
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Entry
BBSC_1084 CDS
T03975
Name
(GenBank) phenylalanyl-tRNA synthase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBSC_1084
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bsca01007
]
BBSC_1084
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsca03016
]
BBSC_1084
Enzymes [BR:
bsca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BBSC_1084
Amino acid related enzymes [BR:
bsca01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BBSC_1084
Transfer RNA biogenesis [BR:
bsca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BBSC_1084
Prokaryotic type
BBSC_1084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAQ31164
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All DBs
Position
1300032..1302629
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AA seq
865 aa
AA seq
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MPMVDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQITGPIVVGYVVDATPEPQ
KNGKTINWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFKIE
PRKTYGHVSDGMCASERELGLGDNHDGIILLRNYGFTPAEYDALKPGDDAMHLLHLDQPL
LEINITPDRGYALSYRGVAREYHHSTGAPYVDPAEELGEKAPVVTGGASDIEVVIDDSNP
IHGVPGCDRYYARAIHGFKPGSHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA
YDLDKLEGPIVVRRAAAGEKLTTLDDKEHELSEEDLLITDSPNGQRGSRILGIAGVMGGL
YGEVTADTKNILLEAAHFDQVSIARSARRHKIPSEASRRFERGVDTQLQPAAAQMAADLL
SKYGDGEPSDKPTDVNNVATRRPIHFKATEVKRVAGLDVDVNRISDILTDIGCRVAGGGN
GEFSVTAPTWRPDLNEACDLVEEVARLVGYDQIPVTVPPAPVEGSVGLTDEQRHRREVAS
ELAEYGMIEALSYPFIGEEDFKAFGYDPARIEPVSVEIANPLAGNRPYLRRSILPTLAGT
VQLNLRRGLDNISLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPDQPMHVAG
ILTGLAENSGWLGGRRAVDWSDAVEAVRRIADRLGAKLTLDQPAAADVPVQWHPGRAARV
MAGDVFVGYVGELHPHVNEALGFPAHSAAFELDLTALFATLDGKPVQAKPISTFPPVKQD
LAFTVPDTVSADQLEAVISQAAGDALESIELFDVFTGDQIGEGLKSLAFAVVFRAPDRTL
TAEDSEAIRKAIVAKAATLGAQLRA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcccatggttgatattgattggctcaaggaccacgtcgaggtccccgagggcctgacc
tacgagcagctggccaaggacctggtcaaggtcggcctcgaggaggaggagatccactcc
tcgcagatcaccggcccgatcgtcgtcggctacgtggtcgacgccacgcccgaaccgcag
aagaacggcaagaccatcaactggtgccacgtcgacgtcggcgacgagtacaacgagacc
gacgagaacggcaacaaggtgccgcgcggcatcatctgcggcgccccgaacatggccgcc
ggcgagaaggtcgtcgtcaccctgcccggcgcggtgctgcccggcgacttcaagatcgag
ccgcgcaagacctacggccacgtctccgacggcatgtgcgcctccgagcgcgagctgggg
ctcggcgataaccacgacggcatcatcctgctgcgcaactacggcttcaccccggccgag
tacgacgcgctcaagcccggcgacgacgcgatgcacctgctgcacctcgaccagccgctg
ctggagatcaacatcacgcccgaccgcggctacgcgctgtcctaccgcggcgtcgcccgc
gagtaccaccattcgaccggcgccccgtacgtcgacccggccgaggagctcggcgagaag
gccccggtggtgaccggcggcgcctccgacatcgaggtcgtgatcgacgacagcaacccg
atccacggcgtgcccggctgcgaccggtactacgcccgcgcgatccacggcttcaagccc
ggcagccacacccccaactggatgcgccgccgcctgatccgcgccggcatgcgctcgatc
tcgctcgccgtcgacgtgaccaactacgtgatgctcgatctgggccagccgatgcacgcc
tacgatctggacaagctcgaagggccgatcgtcgtgcgccgcgcggcggccggcgagaag
ctcaccacgctcgacgacaaggagcacgagctgagcgaagaggacctgctgatcaccgat
tcgccgaacggccagcgcggctcgcgcatcctcggcatcgccggcgtgatgggcggcctg
tacggcgaggtgaccgccgacaccaagaacatcctgctggaggcagcgcacttcgaccag
gtgtcgatcgcccgttccgcgcgccgccacaagatcccgtccgaggcgtcccgccgcttc
gagcgcggcgtcgacacgcagctgcagcccgccgccgcgcagatggccgccgacctgctg
tccaagtacggcgacggtgagccttccgacaagccgaccgacgtgaacaatgtcgccacc
cgccgcccgatccacttcaaggccaccgaggtcaagcgcgtggccggtctcgacgttgac
gtgaaccgcatcagcgacatcctcaccgacatcggctgccgcgtggccggcggcggcaac
ggcgagttctccgtgaccgcgccgacgtggcgcccggatctcaacgaggcgtgcgacctc
gtcgaggaagtggcccgactggtcggctacgaccagatcccggtcaccgtgccgccggca
ccggtcgagggcagcgtcggcctgaccgacgagcagcgccatcgccgcgaggtggccagc
gaactggccgaatacggcatgatcgaggcgctgagctacccgttcatcggcgaggaggac
ttcaaggccttcggctacgacccggcccggatcgagccggtgagcgtcgagatcgccaac
ccgctggcaggcaaccgcccgtacctgcgccgctccatcctgccgaccctcgccggcacc
gtgcagctcaacctgcgccgcggactggacaacatcagcctgtacgagctcggccacgtc
tatctgtgggatccgaacgcgccggccatcccggccctgccgggcggtgtgcgcccgacc
gacgagcagctcgcggcgcttgacgccggtctgcccgaccagccgatgcacgtcgccggc
atcctcaccgggctcgccgagaacagcggctggctgggcggccgccgcgccgtggactgg
agcgacgccgtcgaggccgtccgccgcattgccgatcgtctcggcgccaagctgaccctc
gaccagccggccgccgccgacgtgcccgtgcagtggcacccgggccgcgccgcgcgcgtg
atggccggcgacgtgttcgtcggatacgtcggcgagctgcacccgcacgtcaacgaggcg
ctcggcttccccgcgcactccgccgcgttcgagctcgacctgacggccctgttcgccacg
ctcgacggcaagccggtacaggccaagccgatctccacgttcccgcccgtcaagcaggat
ctcgccttcaccgtgcccgacacggtgagcgccgatcagctggaggccgtgatcagccag
gcggccggcgacgcgctcgagtccatcgagctgttcgacgtgttcaccggcgaccagatc
ggcgagggactgaagtcgctcgcgttcgccgtggtgttccgcgcgcccgaccgcacgctg
accgccgaggacagcgaggcgatccgcaaggcgatcgtcgccaaggcggccacgctcggc
gcccagctgcgcgcgtga
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