Bifidobacterium scardovii: BBSC_1442
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Entry
BBSC_1442 CDS
T03975
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsca03009
]
BBSC_1442
Enzymes [BR:
bsca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BBSC_1442
Ribosome biogenesis [BR:
bsca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBSC_1442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF5994
Motif
Other DBs
NCBI-ProteinID:
BAQ31522
LinkDB
All DBs
Position
complement(1726290..1727063)
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AA seq
257 aa
AA seq
DB search
MPNAYSRAAKAQDSNQEGIRLQKLLAQAGFGSRRKCEQIITEGRVEVDGELVTELGTRVD
IDRQQVRVDGSRIRLNPNHVTLALNKPRRVLSTMDDPKGRYTLRDIVGDKYERIFHMGRL
DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATVSGRISGTVCRRLVTTGVQLDDGWIK
LDHCAIIDANRDSTIVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGELKSGSY
RVLSQAEVRSLSKEVGL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgcatattcccgcgccgcgaaggcgcaagacagtaatcaggaaggcattcgc
ctgcagaagctgctggcgcaggccggattcggatcccgccgcaagtgcgagcagatcatc
accgaaggacgcgtcgaggtcgacggggagctggtcaccgagctcggcacgcgcgtcgac
atcgaccgtcagcaggtgcgcgtcgacggatcgcgcatccgcctcaacccgaaccacgtc
acgctggcgctcaacaagccgcgccgcgtgctgagcacgatggacgacccgaagggccgc
tacacgctgcgcgacatcgtcggcgacaaatacgagcgcatcttccacatgggccgcctg
gactacgattccgagggcctgatcctcatgacgaacgacggcgagctgagccagcacgtc
atgcaccccaagtacgaggtcgaaaagacctatatcgccaccgtttcgggccgcatcagc
ggcaccgtgtgccgccgcctggtcaccacgggcgtgcagctggacgacggatggatcaag
ctcgaccactgcgcgatcatcgacgcgaaccgcgattcgaccatcgtcaaggtcgtgctg
cattcgggcaagaaccgcatcgtgcgccgcatcttcggctcgatcggcttccccgtcaag
cgcctcgtgcgcacgcagatcggcccgatcaagctcggcgagctgaagtccgggtcgtac
cgcgtgctctcgcaggccgaggtgcgttccctctcgaaggaggttgggctgtga
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