KEGG   Bifidobacterium scardovii: BBSC_1452
Entry
BBSC_1452         CDS       T03975                                 
Name
(GenBank) holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
bsca  Bifidobacterium scardovii
Pathway
bsca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBSC_1452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsca03400]
    BBSC_1452
Enzymes [BR:bsca01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BBSC_1452
DNA repair and recombination proteins [BR:bsca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBSC_1452
    RecFOR pathway proteins
     BBSC_1452
SSDB
Motif
Pfam: RuvC DUF3335
Other DBs
NCBI-ProteinID: BAQ31532
LinkDB
Position
complement(1736600..1737181)
AA seq 193 aa
MIILGVDPGLTRCGVGVIEAGAHRRLSFIHVDVVRSSPDTSQDLRLLAIYNGLAEKIERF
APDTVSIERVFAQENRNTVLGTAQAAGLAMLAAAQRGIPVALHTPTESKLAITGNGKAEK
IQVERMVARILGLNEPPKPADAADALAVAICHALRPAGALQGGEREQHLTAAQRQWAEAA
QRSKRRHSVDRGM
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgatcatccttggcgtcgaccccgggctcacccggtgcggggtcggcgtgatcgaagcc
ggcgctcaccgccggctttcgtttatccacgtcgatgtggtgcgctcgtcgcccgatacc
tcgcaggatctgcgcctgctggcgatctacaacggattggccgagaagatcgagcgcttc
gcgccagacaccgtgtcgatcgagcgcgtgttcgcgcaggagaaccgcaacaccgtgctc
ggcaccgcgcaggccgccggcctggcgatgctcgcggccgcgcagcggggcatcccggtg
gccctgcacacgccgaccgaatcgaagctggcgatcaccggcaacggcaaggccgagaag
atccaggtcgagcgcatggtcgcccgcatcctcgggctcaacgagccgccgaagcccgcc
gacgcggccgacgcgctggccgtggcgatctgccatgccctgcgccccgccggcgcgctg
cagggcggcgagcgcgagcagcacctgacggcggcccagcggcagtgggccgaagcagcg
cagcgatccaagcgccggcacagcgtcgaccgcggcatgtag

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