Bifidobacterium scardovii: BBSC_1531
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Entry
BBSC_1531 CDS
T03975
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca03030
DNA replication
bsca03430
Mismatch repair
bsca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBSC_1531
03430 Mismatch repair
BBSC_1531
03440 Homologous recombination
BBSC_1531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsca03032
]
BBSC_1531
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_1531
Enzymes [BR:
bsca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBSC_1531
DNA replication proteins [BR:
bsca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBSC_1531
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBSC_1531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
BAQ31611
LinkDB
All DBs
Position
complement(1800175..1801161)
Genome browser
AA seq
328 aa
AA seq
DB search
MMPREHKGASILAGRNDYVALDLETTGYDPRWDDIIEIGAIKVQNGQPIDRYEQLINPGR
HIPDIITEINGINDDMVKNAPALADVLPGFLDWMGDGLILGHNVNFDINFLYDNAETICS
KHVGNDFIDTLRLARYLYPEERHNRLRDLIVRFDIAENQKHRALADVEQTIACYRWMLRH
MDEDGIPFPSGDGRRRGGASPLFRGDDQLLQVAPQDEITPDPAFEGLTFVFTGALRKMTR
ANAQQAVTNLGGVNGKTVTKTTNYLVTGSTDYCASLKGAKSSKWVKAEKLQLAGQDISII
SEDVFYDMLGDVIAQAPTATEAKRERRN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccagggaacacaagggagccagcatactggccggcaggaacgactacgtagcc
ttggaccttgaaaccaccggctacgatccacgatgggacgacatcatcgaaatcggcgcc
atcaaagtccaaaacggacaacccatcgaccgatacgaacaactcatcaaccccggccgc
cacatcccggacatcatcaccgagatcaacggcatcaacgacgacatggtcaaaaacgcg
ccagcactcgccgacgtgctccctggattcctcgactggatgggcgacggcctcatcctc
ggccacaacgtcaacttcgacatcaacttcctctacgacaacgccgaaaccatctgcagc
aaacacgtcggcaacgacttcatcgacaccctccgcctcgccagatacctctaccccgaa
gaacgccacaaccggctacgcgatctcatcgtcagattcgacatcgccgaaaaccagaaa
cacagggcgctcgccgacgtggagcagaccatcgcctgctaccggtggatgcttcggcat
atggatgaggacgggatcccgtttccgtccggtgatggtcggcgccgcggcggcgcctcg
ccgttgttccgcggggatgaccaattattgcaggtcgccccgcaggatgagattaccccg
gatccagcgttcgagggcctcacgttcgtgttcaccggcgcgctcaggaaaatgacccgc
gccaacgcgcaacaggccgtcaccaacctcggtggcgtcaatggcaaaacggtcaccaag
acgacgaactatctcgtcacgggaagcaccgactactgcgcctctctcaagggcgccaaa
agcagcaaatgggtcaaggccgagaaactccagctcgcaggacaggatatcagcatcatc
agcgaagacgtgttctacgacatgctcggagacgtcatcgcccaagcgcccacggcgacg
gaagcaaagcgcgaacggcggaactaa
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