Bifidobacterium scardovii: BBSC_1668
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Entry
BBSC_1668 CDS
T03975
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bsca
Bifidobacterium scardovii
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsca03032
]
BBSC_1668
03400 DNA repair and recombination proteins [BR:
bsca03400
]
BBSC_1668
Enzymes [BR:
bsca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBSC_1668
DNA replication proteins [BR:
bsca03032
]
Prokaryotic type
DNA Topoisomerases
BBSC_1668
DNA repair and recombination proteins [BR:
bsca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBSC_1668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
DUF4890
Motif
Other DBs
NCBI-ProteinID:
BAQ31748
LinkDB
All DBs
Position
1979640..1982315
Genome browser
AA seq
891 aa
AA seq
DB search
MASHRKPSQPAYDLRQVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IVYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARLGPAALGMNANIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLV
NGGSGIAVGMATNMATHNLGEVVGAAKYLMKYPGASLEELMRYVPGPDWPGGGIIIGRDG
IREAYESGRGSLTTRAATHVENVTARKKAIVVTELPFMVGPERVLERISDGVKNRKLEGI
SGAIDLTDRHNGTRLVIEIKTGFDPNAVLLQLFRHTPLEDGFTMNNVALVDGRPHTMGLK
EMLQVWIDHRRVVVRRRSEYRRKKALERLHLVEGLLLAMIDIDEVIQVIRSSDDADAAKS
RLIAVFDLDDVQAQYILDLRLRRLTRMSRIELEAERDDLKRRIEELERILASAEELDAVV
VREMDEAVETYGSPRRTVLLDAGPDGELTPVVAHGAEGVSASALAAVHAANTVSNAAADV
AAAAAAKKAGEDEAAAAALQIDDEPCAVMMSASGLIARTTPSAVDVWESRSTADTRGAHD
QIVSVFRTSTRATYALITTAGRLVLAHVADLPALPASATLSTAGGVQAEELLGMTESTDP
IRGERVVTAVPMSPAGGGDESLPPLAIGTRGGVVKRWNREAPTTMDSWSVIDLKDGDAVA
FAAQARDDDRIVFVSSDSSLLTFDASNVRPQGRTAGGMAGIRLAEGCHVEAFAVVPAGKV
AWTYEEGDNGLSTSSGAVVLTVAGDKDALAGTENGAAKVTPLEMYPTKGRGTSGVRSQRF
LKGQNTLILAWVGTYPLHASTQAGTPVELPKPDMRRDASGVDLAVPIAFVA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgcatcgcaagccgtcacagcccgcctatgacctgcgccaggtcaaggaacac
atcgtcgaaacgccgctgaacgaggagatgagcaagtccttcctcgaatacgcgtactcg
gtgatctacgcgcgcgccctgcccgatgcccgcgacggcctcaagcccgtgcagcgccgc
atcgtctaccagatgggcgagatgaacctcacgccggaccgcccgtacatgaagtcggcg
cgcgtggtcggcgaggtgatgggcaagctgcacccgcacggcgattccgcgatctacgag
gcgatggtgcgcctcgcccagccgttcgcgatgcgtctgccgctggtcgacggccacggc
aacttcggctcgctcgacgatggtccggccgcttcccgatacaccgaggccaggctcggg
ccggccgcgctcggcatgaacgcgaacatcgacgaggacacggtcgatttcacgccaaac
tacgacaacaagctcaaggagccgaccgtcctgccggccgccatcccgaacctgctggtc
aacggcggctcgggcatcgccgtcggcatggccacgaacatggcgacccacaacctcggc
gaggtcgtcggcgcagcgaaatacctgatgaagtacccgggcgcctcgctcgaggagctg
atgcgctacgtgccgggccccgactggccgggcggcggcatcatcatcggccgcgacggc
atccgcgaggcgtacgagtccggccgcggatcgctgacgacccgcgccgccacgcatgtg
gagaacgtgaccgcccgcaagaaggcgatcgtggtgaccgaactgccgttcatggtcggc
cccgagcgtgtgctcgaacgcatctccgacggcgtgaagaaccgcaagctcgagggcatc
tcgggcgcgatcgacctgaccgaccgccacaacggcacccgcctggtgatcgagatcaag
accggcttcgacccgaacgcggtgctgctgcagctgttcaggcacacgccgttggaggac
ggcttcaccatgaacaacgtggcgctggtggacggccgcccgcacaccatgggcctcaag
gagatgctgcaggtctggatcgaccaccgccgcgtggtggtgcgccggcgcagcgaatac
cgccgcaagaaggcgctcgagcggctgcatctggtcgagggcctgctgctcgcgatgatc
gacatcgacgaggtgatccaggtgatccgctcctccgacgacgcggacgcggcgaaaagc
cgcctgatcgccgtgttcgacctcgacgacgtccaggcccagtacatcctcgatctgcgg
ctgcggcgcctgacccgcatgagccgcatcgagctcgaggcggagcgcgacgatctgaag
cgccgcatcgaggagctggagcgcatcctcgcctcggccgaggaactggacgccgtggtg
gtgcgcgaaatggacgaggcggtcgagacctacgggtcgccgcggcgcaccgtgctgctc
gacgccggcccggacggcgagctgacgcccgtggtggcgcacggcgccgaaggcgtgtcc
gcatcggcgctggccgccgtgcatgcggcgaacaccgtatcgaacgcggccgccgacgtg
gccgccgccgcggcggcgaagaaggccggcgaggacgaggccgcagccgctgccctgcag
atcgacgacgagccgtgcgcggtgatgatgagcgcctccgggctgatcgcccgcaccacg
ccgtcggcggtggacgtgtgggaatcgcgctcgaccgccgatacccgcggcgcgcacgac
cagatcgtctccgtgttccgcacgtccacgcgcgccacgtatgcgctgatcacgacggcc
ggcaggctcgtgctggcccatgtcgccgacctgccggcgctgccggcttcggcgacgctg
agcacggccggcggcgtgcaggccgaggagctgctcggcatgaccgaaagcaccgatccg
atccgcggcgaacgcgtggtgaccgcggtgccgatgagcccggccggcggcggcgacgag
tcgctgccgccgttggcgatcggcacgcggggtggcgtggtcaagcgttggaaccgcgag
gcgccgacgaccatggattcgtggagcgtcatcgacctcaaggacggcgacgccgtggcg
ttcgccgcccaggcgcgcgacgacgaccgcatcgtgttcgtgtcgtcggattcctcgctg
ctcaccttcgacgcctcgaatgtgcgcccgcagggccgcaccgcgggcggcatggccggc
atcaggctggccgaggggtgccacgtcgaggcgttcgccgtggtgcccgccggcaaggtc
gcatggacctacgaggagggcgacaacggcctgtccacgtcctcgggggccgtggtgctg
accgtcgccggcgacaaggacgcgctggccggcaccgaaaacggcgccgcgaaggtgacg
ccgctggagatgtacccgaccaagggccgcggcacgagcggcgtgcgttcgcagcgcttc
ctcaaggggcagaacacgctgatcctcgcgtgggtcggcacgtacccgctgcacgcctcc
acgcaggccggcacgcccgtcgagctgccgaagcccgatatgcgccgcgacgcctccggc
gtcgacctcgccgtcccgatcgcgttcgtcgcgtaa
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